RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ANKRD49Q8WVL7 239 aa11.19□□□□□ -0.62
CTSA-209ENST00000493522 PPM1MQ96MI6 270 aa11.19□□□□□ -0.62
CTSA-209ENST00000493522 ZNF768Q9H5H4 540 aaKnown RBP11.19□□□□□ -0.62
CTSA-209ENST00000493522 SNX15Q9NRS6 342 aa11.19□□□□□ -0.62
CTSA-209ENST00000493522 PDP2Q9P2J9 529 aa11.19□□□□□ -0.62
CTSA-209ENST00000493522 CTNNAL1Q9UBT7 734 aa11.19□□□□□ -0.62
CTSA-209ENST00000493522 IKZF3Q9UKT9 509 aa11.19□□□□□ -0.62
CTSA-209ENST00000493522 PDE10AQ9Y233 779 aa11.19□□□□□ -0.62
CTSA-209ENST00000493522 UBR5O95071 2799 aaPredicted RBP11.19□□□□□ -0.62
CTSA-209ENST00000493522 TLN1Q9Y490 2541 aaKnown RBP11.18□□□□□ -0.62
CTSA-209ENST00000493522 SPTBP11277 2137 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 IGHV5-51A0A0C4DH38 117 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 A0A0J9YY10 115 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 ZNF839A8K0R7 811 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 TRIM49D1C9J1S8 452 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 CDC7O00311 574 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 WISP3O95389 354 aaPredicted RBP11.18□□□□□ -0.62
CTSA-209ENST00000493522 HIST1H2AGP0C0S8 130 aaPredicted RBP11.18□□□□□ -0.62
CTSA-209ENST00000493522 SLC35E2BP0CK96 405 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 LIPCP11150 499 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PVRP15151 417 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 HIST1H2ADP20671 130 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PSMB5P28074 263 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 CRABP2P29373 138 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PRDX3P30048 256 aaKnown RBP11.18□□□□□ -0.62
CTSA-209ENST00000493522 GMPRP36959 345 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 ETV5P41161 510 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PNLIPRP1P54315 467 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 CSHL1Q14406 222 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 EMBQ6PCB8 327 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 ADAMTSL2Q86TH1 951 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 SYTL1Q8IYJ3 562 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 SPATA6LQ8N4H0 392 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PPFIBP2Q8ND30 876 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 DCAKDQ8WVC6 231 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 DLG3Q92796 817 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PDLIM5Q96HC4 596 aaKnown RBP11.18□□□□□ -0.62
CTSA-209ENST00000493522 HIST1H2AHQ96KK5 128 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 OR2A14Q96R47 310 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 HIST1H2AJQ99878 128 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 CCDC77Q9BR77 488 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 H2AFJQ9BTM1 129 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 SLC12A9Q9BXP2 914 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PARD6BQ9BYG5 372 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 TRIM54Q9BYV2 358 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 DERL2Q9GZP9 239 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 KLHL25Q9H0H3 589 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PARVBQ9HBI1 364 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 C1GALT1Q9NS00 363 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 ABCF3Q9NUQ8 709 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 OCIAD1Q9NX40 245 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 ARL15Q9NXU5 204 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 UTP6Q9NYH9 597 aaKnown RBP11.18□□□□□ -0.62
CTSA-209ENST00000493522 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.18□□□□□ -0.62
CTSA-209ENST00000493522 ZNF180Q9UJW8 692 aa11.18□□□□□ -0.62
CTSA-209ENST00000493522 PTPN13Q12923 2485 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 A0A087X1B8 175 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 HMX2A2RU54 273 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SLC9B1P1A6NJY1 282 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SMIM23A6NLE4 172 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 NVLO15381 856 aaKnown RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 EFSO43281 561 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 MAP3K7O43318 606 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 ZBTB11O95625 1053 aaPredicted RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 GUCA1CO95843 209 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SLC16A8O95907 504 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 ENO2P09104 434 aaPredicted RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 EBLN1P0CF75 366 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 ERGP11308 486 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SFTPCP11686 197 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 CCL4P13236 92 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 ST6GAL1P15907 406 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 NELFEP18615 380 aaKnown RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 CNTFP26441 200 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 IMPA1P29218 277 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 TYK2P29597 1187 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 OAS2P29728 719 aaKnown RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 RPA3P35244 121 aaPredicted RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 HSD17B3P37058 310 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 HSD17B2P37059 387 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 AP1S2P56377 157 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 ATP6V0D1P61421 351 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 TBPL1P62380 186 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 IRF9Q00978 393 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 FOXM1Q08050 763 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 FASTKQ14296 549 aaKnown RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 KCNAB1Q14722 419 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 NAA30Q147X3 362 aaPredicted RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 ARHGAP19Q14CB8 494 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 TSNQ15631 228 aaKnown RBP11.17□□□□□ -0.62
CTSA-209ENST00000493522 CYP2A13Q16696 494 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SLC5A12Q1EHB4 618 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 MANEAQ5SRI9 462 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 THEMIS2Q5TEJ8 643 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SUSD1Q6UWL2 747 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 SBSNQ6UWP8 590 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 KMT5CQ86Y97 462 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 FAM20CQ8IXL6 584 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 CARFQ8N187 725 aa11.17□□□□□ -0.62
CTSA-209ENST00000493522 EXD3Q8N9H8 876 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms