RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CATP04040 527 aaKnown RBP11.93□□□□□ -0.5
COL6A1-205ENST00000492851 UMODP07911 640 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 PKMP14618 531 aaKnown RBP11.93□□□□□ -0.5
COL6A1-205ENST00000492851 MAGEA6P43360 314 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 KCNJ1P48048 391 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 OCA2Q04671 838 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 SLC9A5Q14940 896 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 NKG7Q16617 165 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 PLEKHN1Q494U1 663 aaPredicted RBP11.93□□□□□ -0.5
COL6A1-205ENST00000492851 WASHC2DQ5SRD0 308 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 PRAMEF13Q5VWM6 474 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 NEPROQ6NW34 567 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 CASC4Q6P4E1 433 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 NEK10Q6ZWH5 1172 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 LRRC8AQ8IWT6 810 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 FAM20CQ8IXL6 584 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 LMNTD2Q8IXW0 634 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 Q8NA96 180 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 OR2A1Q8NGT9 310 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 OR9A1PQ8NGU1 263 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 SMPDL3AQ92484 453 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 LPGAT1Q92604 370 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 ILKAPQ9H0C8 392 aaPredicted RBP11.93□□□□□ -0.5
COL6A1-205ENST00000492851 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 XAB2Q9HCS7 855 aaKnown RBP11.93□□□□□ -0.5
COL6A1-205ENST00000492851 ZNF304Q9HCX3 659 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 SLC22A11Q9NSA0 550 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 SYBUQ9NX95 663 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 MAP10Q9P2G4 905 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 KLHL20Q9Y2M5 609 aa11.93□□□□□ -0.5
COL6A1-205ENST00000492851 FAM237BA0A1B0GVD1 139 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 BLACEA4D250 179 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 VSTM2BA6NLU5 285 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 TCP11X1B4DZS4 312 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 TXNDC9O14530 226 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 PCDH17O14917 1159 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CCNDBP1O95273 360 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CTSBP07858 339 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 ERVK-10P10266 1014 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 ITGA3P26006 1051 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 VSX2P58304 361 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-205ENST00000492851 RELAQ04206 551 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 GPS1Q13098 491 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 RAPSNQ13702 412 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 THOC5Q13769 683 aaKnown RBP11.92□□□□□ -0.5
COL6A1-205ENST00000492851 MUM1Q2TAK8 710 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CTSL3PQ5NE16 218 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 AGAP7PQ5VUJ5 663 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CNSTQ6PJW8 725 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 TAX1BP1Q86VP1 789 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CILP2Q8IUL8 1156 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 PRELID2Q8N945 189 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 MCUQ8NE86 351 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 GABPB2Q8TAK5 448 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CALML6Q8TD86 181 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 SSC4DQ8WTU2 575 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 MVB12AQ96EY5 273 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 PBKQ96KB5 322 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 AGAP4Q96P64 663 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 MIPEPQ99797 713 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 EBNA1BP2Q99848 306 aaKnown RBP11.92□□□□□ -0.5
COL6A1-205ENST00000492851 ZFYVE21Q9BQ24 234 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 AGPAT4Q9NRZ5 378 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 ZNF282Q9UDV7 671 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-205ENST00000492851 ZC3H7BQ9UGR2 993 aaKnown RBP11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CIDEBQ9UHD4 219 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CRYL1Q9Y2S2 319 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 JRKLQ9Y4A0 524 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 COPG1Q9Y678 874 aaKnown RBP11.92□□□□□ -0.5
COL6A1-205ENST00000492851 NFS1Q9Y697 457 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 COMMD10Q9Y6G5 202 aa11.92□□□□□ -0.5
COL6A1-205ENST00000492851 CTAGE9A4FU28 777 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 ZBTB14O43829 449 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 CNOT3O75175 753 aaKnown RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 PSIP1O75475 530 aaKnown RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 KRT14P02533 472 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 ERGP11308 486 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 ENO3P13929 434 aaPredicted RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 ARNTP27540 789 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 RPA3P35244 121 aaPredicted RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 UQCRFS1P47985 274 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 ABATP80404 500 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 DHX34Q14147 1143 aaKnown RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 ELOAQ14241 798 aaKnown RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 GBX1Q14549 363 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 RBBP7Q16576 425 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 KLHL38Q2WGJ6 581 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 TUBB8Q3ZCM7 444 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 GARNL3Q5VVW2 1013 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 CES3Q6UWW8 571 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 Q6ZS92 163 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 RNF44Q7L0R7 432 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 FBXO15Q8NCQ5 510 aaPredicted RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 KCNJ9Q92806 393 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 MAGOHBQ96A72 148 aaKnown RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 SNRNP40Q96DI7 357 aaKnown RBP11.91□□□□□ -0.5
COL6A1-205ENST00000492851 SPSB2Q99619 263 aa11.91□□□□□ -0.5
COL6A1-205ENST00000492851 DPH7Q9BTV6 452 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms