RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	SELENOO	Q9BVL4	669 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	YIPF2	Q9BWQ6	316 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	SHARPIN	Q9H0F6	387 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	DEFB127	Q9H1M4	99 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	XKR8	Q9H6D3	395 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	KCNK13	Q9HB14	408 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF304	Q9HCX3	659 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	ANO10	Q9NW15	660 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	ALKBH4	Q9NXW9	302 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	EURL	Q9NYK6	297 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	IL1RAPL1	Q9NZN1	696 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	ARMCX1	Q9P291	453 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	FAM8A1	Q9UBU6	413 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	CHKB	Q9Y259	395 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	EIF3L	Q9Y262	564 aa	Known RBP	5.08	□□□□□ -1.6
SEC13-219	ENST00000492602	DNAJC13	O75165	2243 aa		5.08	□□□□□ -1.6
SEC13-219	ENST00000492602		A0A1W2PQ72	361 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	OR2AG2	A6NM03	316 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	QSOX1	O00391	747 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	DVL2	O14641	736 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CASK	O14936	926 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	EPHB6	O15197	1021 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	MAN1A2	O60476	641 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	RNF8	O76064	485 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	SLC4A1	P02730	911 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CALB1	P05937	261 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	HEXB	P07686	556 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	SLC35G4	P0C7Q5	338 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	UCHL3	P15374	230 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CYP11B1	P15538	503 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CREB1	P16220	341 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	UGT2B7	P16662	529 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	SRD5A1	P18405	259 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	MCM3	P25205	808 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	HTR7	P34969	479 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	PTPN9	P43378	593 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	AIF1	P55008	147 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	ATP5J2	P56134	94 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	UBXN1	Q04323	297 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CLEC12B	Q2HXU8	276 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	BTBD16	Q32M84	506 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	FAM182A	Q5T1J6	154 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	C6orf52	Q5T4I8	152 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	KLHDC7A	Q5VTJ3	777 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	NAA35	Q5VZE5	725 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	PDPK2P	Q6A1A2	396 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	TMEM220	Q6QAJ8	160 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	DAAM2	Q86T65	1068 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	AMIGO1	Q86WK6	493 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	ADGRF3	Q8IZF5	1079 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	LIX1	Q8N485	282 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	C3orf56	Q8N813	242 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	OR52E1	Q8NGJ3	308 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	ENOX1	Q8TC92	643 aa	Known RBP	5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CREB3L4	Q8TEY5	395 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	NSMCE1	Q8WV22	266 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CPA5	Q8WXQ8	436 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	RBM41	Q96IZ5	413 aa	Known RBP	5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	IMMP1L	Q96LU5	166 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	FERD3L	Q96RJ6	166 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	LYSMD1	Q96S90	227 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	NPAS2	Q99743	824 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CNPY3	Q9BT09	278 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	CHRNA10	Q9GZZ6	450 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF700	Q9H0M5	742 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	C12orf65	Q9H3J6	166 aa	Known RBP	5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	PLSCR2	Q9NRY7	297 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	ADAM22	Q9P0K1	906 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	LPAR3	Q9UBY5	353 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	MTRF1L	Q9UGC7	380 aa	Known RBP	5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	BIRC6	Q9NR09	4857 aa		5.07	□□□□□ -1.6
SEC13-219	ENST00000492602	LOC102723996	A0A087X1L8	192 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	IGHV3-20	A0A0C4DH32	117 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602		A0A0J9YY10	115 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	C2CD4B	A6NLJ0	364 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	HSPB2	A8KAH6	182 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	KLRC4-KLRK1	H3BQV0	150 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	EEF2K	O00418	725 aa	Known RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	DDX3X	O00571	662 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	FFAR3	O14843	346 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	BCKDK	O14874	412 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	GPR42	O15529	346 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	SEC24D	O94855	1032 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	PEX11B	O96011	259 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	PRL	P01236	227 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	POLB	P06746	335 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	CHRNB2	P17787	502 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	CDH5	P33151	784 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	MMP13	P45452	471 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF135	P52742	658 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	VSX2	P58304	361 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	POLR2F	P61218	127 aa	Known RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	NOMO3	P69849	1222 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	SORD	Q00796	357 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	CDR2	Q01850	454 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	PTP4A2	Q12974	167 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	GRM7	Q14831	915 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	HSPB2	Q16082	182 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	TAZ	Q16635	292 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms