RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 CDC14AQ9UNH5 594 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 COMMD10Q9Y6G5 202 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 CCDC88CQ9P219 2028 aa8.4□□□□□ -1.06
NUP50-217ENST00000491860 TEP1Q99973 2627 aaKnown RBP8.4□□□□□ -1.07
NUP50-217ENST00000491860 PRRC2CQ9Y520 2896 aaKnown RBP8.4□□□□□ -1.07
NUP50-217ENST00000491860 SHANK1Q9Y566 2161 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.39□□□□□ -1.07
NUP50-217ENST00000491860 E5RI56 91 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 VAPBO95292 243 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 C1orf105O95561 183 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 CATP04040 527 aaKnown RBP8.39□□□□□ -1.07
NUP50-217ENST00000491860 ERVK-10P10266 1014 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 MLNP12872 115 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 ETS1P14921 441 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 CHRM3P20309 590 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 FDXRP22570 491 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 MAGEA6P43360 314 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 EIF3BP55884 814 aaKnown RBP8.39□□□□□ -1.07
NUP50-217ENST00000491860 RELAQ04206 551 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 OCA2Q04671 838 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 ELOAQ14241 798 aaKnown RBP8.39□□□□□ -1.07
NUP50-217ENST00000491860 GRB7Q14451 532 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 SEMA3AQ14563 771 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 SIX1Q15475 284 aaPredicted RBP8.39□□□□□ -1.07
NUP50-217ENST00000491860 MUM1Q2TAK8 710 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 TUBB8Q3ZCM7 444 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 LRRC8EQ6NSJ5 796 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 NAPRTQ6XQN6 538 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 GAS2L3Q86XJ1 694 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 VRK3Q8IV63 474 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 KRT222Q8N1A0 295 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 RBMXL3Q8N7X1 1067 aaKnown RBP8.39□□□□□ -1.07
NUP50-217ENST00000491860 CALML6Q8TD86 181 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 SSC4DQ8WTU2 575 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 SMPDL3AQ92484 453 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 EBNA1BP2Q99848 306 aaKnown RBP8.39□□□□□ -1.07
NUP50-217ENST00000491860 CCDC68Q9H2F9 335 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 EPS8L2Q9H6S3 715 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 LZTFL1Q9NQ48 299 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 AGPAT4Q9NRZ5 378 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 MARCH4Q9P2E8 410 aaPredicted RBP8.39□□□□□ -1.07
NUP50-217ENST00000491860 MAP10Q9P2G4 905 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 CDC23Q9UJX2 597 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 CREBBPQ92793 2442 aa8.39□□□□□ -1.07
NUP50-217ENST00000491860 A0A0U1RQJ8 604 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 FAM237BA0A1B0GVD1 139 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 IQCF5A8MTL0 148 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 EIF3FO00303 357 aaPredicted RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 PRICKLE3O43900 615 aaPredicted RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 CEP104O60308 925 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 MATN4O95460 622 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 UMODP07911 640 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 ZSCAN5DPP0CG00 497 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 ENO3P13929 434 aaPredicted RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 GNLYP22749 145 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 ITGA3P26006 1051 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 RPA3P35244 121 aaPredicted RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 GRIA3P42263 894 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 ABATP80404 500 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 THOC5Q13769 683 aaKnown RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 RBBP7Q16576 425 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 NKG7Q16617 165 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 AGAP7PQ5VUJ5 663 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 GARNL3Q5VVW2 1013 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 PRAMEF13Q5VWM6 474 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 B3GNTL1Q67FW5 361 aaPredicted RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 FCRL6Q6DN72 434 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 CASC4Q6P4E1 433 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 Q6ZS92 163 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 RNF44Q7L0R7 432 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 PPP1R32Q7Z5V6 425 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 FBXO15Q8NCQ5 510 aaPredicted RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 MCUQ8NE86 351 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 OR2L3Q8NG85 312 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 OR9A1PQ8NGU1 263 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 LKAAEAR1Q8TD35 194 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 PPP4R1Q8TF05 950 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 GRK7Q8WTQ7 553 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 LPGAT1Q92604 370 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 PBKQ96KB5 322 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 BIRC8Q96P09 236 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 AGAP4Q96P64 663 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 NRTNQ99748 197 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 ZFYVE21Q9BQ24 234 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 LHPPQ9H008 270 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 ZNF552Q9H707 407 aaPredicted RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 ZNF304Q9HCX3 659 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 C14orf105Q9NVL8 296 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 ZNF282Q9UDV7 671 aaPredicted RBP8.38□□□□□ -1.07
NUP50-217ENST00000491860 CNTRLQ7Z7A1 2325 aa8.38□□□□□ -1.07
NUP50-217ENST00000491860 CELSR2Q9HCU4 2923 aa8.37□□□□□ -1.07
NUP50-217ENST00000491860 LRBAP50851 2863 aa8.37□□□□□ -1.07
NUP50-217ENST00000491860 HIVEP3Q5T1R4 2406 aa8.37□□□□□ -1.07
NUP50-217ENST00000491860 HYKKA2RU49 373 aa8.37□□□□□ -1.07
NUP50-217ENST00000491860 CTAGE9A4FU28 777 aa8.37□□□□□ -1.07
NUP50-217ENST00000491860 SDR42E2A6NKP2 422 aa8.37□□□□□ -1.07
NUP50-217ENST00000491860 VSTM2BA6NLU5 285 aa8.37□□□□□ -1.07
NUP50-217ENST00000491860 MYO1CO00159 1063 aa8.37□□□□□ -1.07
NUP50-217ENST00000491860 MAP2K7O14733 419 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms