RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CD9P21926 228 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 PSMB5P28074 263 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 CCR7P32248 378 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 VSX2P58304 361 aaPredicted RBP12.61□□□□□ -0.39
USF1-206ENST00000491629 PMP22Q01453 160 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 ITIH4Q14624 930 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 GRM7Q14831 915 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 INAQ16352 499 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 WASHC2DQ5SRD0 308 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 YOD1Q5VVQ6 348 aaPredicted RBP12.61□□□□□ -0.39
USF1-206ENST00000491629 TMEM207Q6UWW9 146 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 KBTBD2Q8IY47 623 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 SLC22A15Q8IZD6 547 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 ADAMTS18Q8TE60 1221 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 C10orf90Q96M02 699 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 SPATA13Q96N96 652 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 SELENOSQ9BQE4 189 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 ZNF304Q9HCX3 659 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 ABI3Q9P2A4 366 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 C3orf18Q9UK00 162 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 MRPS2Q9Y399 296 aaKnown RBP12.61□□□□□ -0.39
USF1-206ENST00000491629 AKAP6Q13023 2319 aa12.61□□□□□ -0.39
USF1-206ENST00000491629 VPS13CQ709C8 3753 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 DYTNA2CJ06 578 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 CCDC162PA2VCL2 907 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 MROH6A6NGR9 719 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 MAP2K7O14733 419 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 FFAR3O14843 346 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 GPR42O15529 346 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 KCNN4O15554 427 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 GPC4O75487 556 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 METTL18O95568 372 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 FTH1P02794 183 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 RBP3P10745 1247 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 ITGAMP11215 1152 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 HADHBP55084 474 aaKnown RBP12.6□□□□□ -0.39
USF1-206ENST00000491629 EEF1A2Q05639 463 aaKnown RBP12.6□□□□□ -0.39
USF1-206ENST00000491629 POU6F1Q14863 301 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 C3AR1Q16581 482 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 KRTAP21-3Q3LHN1 58 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 TCTE1Q5JU00 501 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 SPNS3Q6ZMD2 512 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 NCCRP1Q6ZVX7 275 aaPredicted RBP12.6□□□□□ -0.39
USF1-206ENST00000491629 NDUFAF7Q7L592 441 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 TMTC1Q8IUR5 882 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 SHISA5Q8N114 240 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 OR2L8Q8NGY9 312 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 DENND1AQ8TEH3 1009 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 STYXQ8WUJ0 223 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 MIEF2Q96C03 454 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 ABHD10Q9NUJ1 306 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 SUCOQ9UBS9 1254 aaKnown RBP12.6□□□□□ -0.39
USF1-206ENST00000491629 SEC14L3Q9UDX4 400 aa12.6□□□□□ -0.39
USF1-206ENST00000491629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.6□□□□□ -0.39
USF1-206ENST00000491629 IGHV1-45A0A0A0MS14 117 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 NSG1A0A0A6YYJ2 146 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 HYKKA2RU49 373 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 IQCF5A8MTL0 148 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 USP1O94782 785 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 S1PR4O95977 384 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 SERPINA7P05543 415 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 MSNP26038 577 aaKnown RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 CARSP49589 748 aaKnown RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 EIF3EP60228 445 aaKnown RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 SNRPNP63162 240 aaKnown RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 PRPSAP1Q14558 356 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 SEMA3AQ14563 771 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 PCOLCEQ15113 449 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 SF1Q15637 639 aaKnown RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 FAM214AQ32MH5 1076 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 CCSMST1Q4G0I0 132 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 SYTL3Q4VX76 610 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 CCDC38Q502W7 563 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 ZC3H12BQ5HYM0 836 aaKnown RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 AADACL2Q6P093 401 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 RPTNQ6XPR3 784 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 TTC29Q8NA56 475 aaPredicted RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 ACBD4Q8NC06 268 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 OR13J1Q8NGT2 312 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 CFAP61Q8NHU2 1237 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 IL1RAPL1Q9NZN1 696 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 ZNF282Q9UDV7 671 aaPredicted RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 ZC3H7BQ9UGR2 993 aaKnown RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 FEZ2Q9UHY8 353 aaPredicted RBP12.59□□□□□ -0.39
USF1-206ENST00000491629 TINAGQ9UJW2 476 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 INTUQ9ULD6 942 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 KLK4Q9Y5K2 254 aa12.59□□□□□ -0.39
USF1-206ENST00000491629 A0A0J9YVX5 310 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 A0A1W2PPV9 198 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 SYCE3A1L190 88 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 IDSB3KWA1 339 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 QSOX1O00391 747 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 RASGRF2O14827 1237 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 PJA2O43164 708 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 ZNHIT1O43257 154 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 BMP10O95393 424 aa12.58□□□□□ -0.4
USF1-206ENST00000491629 PLOD1Q02809 727 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms