RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 RNF31Q96EP0 1072 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 HIST1H2AHQ96KK5 128 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 HIST1H2AJQ99878 128 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 H2AFJQ9BTM1 129 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ACAT2Q9BWD1 397 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TRIM54Q9BYV2 358 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 IKZF3Q9UKT9 509 aa15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 NOVA2Q9UNW9 492 aaKnown RBP15.67■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 A0A087WUV0 522 aaPredicted RBP15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 NPEPPSL1A6NEC2 478 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TARM1B6A8C7 271 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CCNDBP1O95273 360 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FAM153BP0C7A2 387 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 GRIA3P42263 894 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 GABRA4P48169 554 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 UCNP55089 124 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ITGA1P56199 1179 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 AP1S2P56377 157 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 RAB10P61026 200 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FAM153CQ494X1 144 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MANEAQ5SRI9 462 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 FCRL6Q6DN72 434 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SBSNQ6UWP8 590 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TIPARPQ7Z3E1 657 aaKnown RBP15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 GSPT2Q8IYD1 628 aaKnown RBP15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 LRRC56Q8IYG6 542 aaPredicted RBP15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 DNAJC22Q8N4W6 341 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 IL22RA1Q8N6P7 574 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 OR1L3Q8NH93 324 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 NKD1Q969G9 470 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ZUFSPQ96AP4 578 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 DERL2Q9GZP9 239 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MRPS30Q9NP92 439 aaKnown RBP15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CCDC177Q9NQR7 707 aaPredicted RBP15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ARL15Q9NXU5 204 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TAC3Q9UHF0 121 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SERTAD3Q9UJW9 196 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SSUH2Q9Y2M2 353 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 KLK4Q9Y5K2 254 aa15.66■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TEX51A0A1B0GUA7 166 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CDC7O00311 574 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CPNE3O75131 537 aaKnown RBP15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SCRG1O75711 98 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ABHD2P08910 425 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CCDC166P0CW27 439 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TNFRSF8P28908 595 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PMS2P54278 862 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TMPRSS3P57727 454 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TBPL1P62380 186 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 BMPR2Q13873 1038 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PPP1R3AQ16821 1122 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 THEMIS2Q5TEJ8 643 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 MROH9Q5TGP6 573 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 C19orf48Q6RUI8 117 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 AGTRAPQ6RW13 159 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 C6orf15Q6UXA7 325 aaPredicted RBP15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 RAPH1Q70E73 1250 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 TRMT10CQ7L0Y3 403 aaKnown RBP15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CMC1Q7Z7K0 106 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ADAMTSL2Q86TH1 951 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 VASH2Q86V25 355 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ESX1Q8N693 406 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 GALNT6Q8NCL4 622 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 UHMK1Q8TAS1 419 aaKnown RBP15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SLC44A1Q8WWI5 657 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CCNL2Q96S94 520 aaPredicted RBP15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 SLC6A20Q9NP91 592 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ABCF3Q9NUQ8 709 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 ANKMY1Q9P2S6 941 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 CTNNAL1Q9UBT7 734 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 PLCL2Q9UPR0 1127 aa15.65■□□□□ 0.1
MSH5-SAPCD1-206ENST00000491552 E7EQ34 232 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 HCRTR1O43613 425 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SLU7O95391 586 aaKnown RBP15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 GUCA1CO95843 209 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 MT-ND3P03897 115 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 INHBAP08476 426 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 MYBL2P10244 700 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CRABP2P29373 138 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 YBX1P67809 324 aaKnown RBP15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ABATP80404 500 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PRDX1Q06830 199 aaKnown RBP15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ABHD18Q0P651 414 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ACACAQ13085 2346 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SRSF6Q13247 344 aaKnown RBP15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TSNQ15631 228 aaKnown RBP15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 COL28A1Q2UY09 1125 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZC3H12BQ5HYM0 836 aaKnown RBP15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PRAMEF13Q5VWM6 474 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ICE2Q659A1 982 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 FRA10AC1Q70Z53 315 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 GPR135Q8IZ08 494 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ATL1Q8WXF7 558 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 FBXL8Q96CD0 374 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 MED8Q96G25 268 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PAFAH2Q99487 392 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DPH7Q9BTV6 452 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TXLNGYQ9BZA5 131 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ATG10Q9H0Y0 220 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 UTP6Q9NYH9 597 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms