RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 CFAP54Q96N23 3096 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 EPB42P16452 691 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 PIK3CGP48736 1102 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 LCP2Q13094 533 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 DBX2Q6ZNG2 339 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 LSMEM2Q8N112 164 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 TRPC4APQ8TEL6 797 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 BTBD3Q9Y2F9 522 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 PCDHGB2Q9Y5G2 931 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 A0A1W2PPV9 198 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 PPP6CO00743 305 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 SIGLEC6O43699 453 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 HSPA4LO95757 839 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 MLYCDO95822 493 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 EPORP19235 508 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 OCRLQ01968 901 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 TUBB8Q3ZCM7 444 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 EID2Q8N6I1 236 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 SETD7Q8WTS6 366 aaKnown RBP21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 SH3KBP1Q96B97 665 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 SORT1Q99523 831 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 TBC1D10AQ9BXI6 508 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 NOL11Q9H8H0 719 aaKnown RBP21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 IPPKQ9H8X2 491 aa21.02■□□□□ 0.96
VCPKMT-204ENST00000491402 SNRNP200O75643 2136 aaKnown RBP21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 FAM221BA6H8Z2 402 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 UBFD1O14562 309 aaKnown RBP21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 NUDT21O43809 227 aaKnown RBP21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 KATNA1O75449 491 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 GALNT1Q10472 559 aaPredicted RBP21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 CDC16Q13042 620 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 THEMIS2Q5TEJ8 643 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 PRAMEF13Q5VWM6 474 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 FAM47EQ6ZV65 393 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 ADGRF3Q8IZF5 1079 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 SNX31Q8N9S9 440 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 FAM181AQ8N9Y4 354 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 OR52B6Q8NGF0 335 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 APOLD1Q96LR9 279 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 ZNF317Q96PQ6 595 aaPredicted RBP21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 SLC38A3Q99624 504 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 LRIT1Q9P2V4 623 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 RNF215Q9Y6U7 377 aa21.01■□□□□ 0.95
VCPKMT-204ENST00000491402 LILRA5A6NI73 299 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 RHPN2P1A8MT19 583 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 BTN3A3O00478 584 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 OR7A17O14581 309 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 SH3BP5O60239 455 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 CHRM5P08912 532 aaPredicted RBP21■□□□□ 0.95
VCPKMT-204ENST00000491402 MYF5P13349 255 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 GLB1P16278 677 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 NPPBP16860 134 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 PSMB5P28074 263 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 RBBP7Q16576 425 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 RHBDD1Q8TEB9 315 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 MIPEPQ99797 713 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 SHCBP1LQ9BZQ2 653 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 EML4Q9HC35 981 aaKnown RBP21■□□□□ 0.95
VCPKMT-204ENST00000491402 TAC3Q9UHF0 121 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 A0A1B0GTL3 188 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 VIMP08670 466 aaKnown RBP21■□□□□ 0.95
VCPKMT-204ENST00000491402 PEBP1P30086 187 aaKnown RBP21■□□□□ 0.95
VCPKMT-204ENST00000491402 LIMK1P53667 647 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 SH3BP2P78314 561 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 LCTLQ6UWM7 567 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 C7orf26Q96N11 449 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 ZNF382Q96SR6 550 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 ACAT2Q9BWD1 397 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 TWSG1Q9GZX9 223 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 PCBD2Q9H0N5 130 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 SPHK1Q9NYA1 384 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 PADI4Q9UM07 663 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 KCNE2Q9Y6J6 123 aa21■□□□□ 0.95
VCPKMT-204ENST00000491402 RP1P56715 2156 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 LY6G6EA0A0G2JKS1 128 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 OR6C74A6NCV1 312 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 FLRT2O43155 660 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 PRICKLE3O43900 615 aaPredicted RBP20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 SHOX2O60902 331 aaPredicted RBP20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 SNUPNO95149 360 aaKnown RBP20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 PRDX3P30048 256 aaKnown RBP20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 GRK6P43250 576 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 NR0B2Q15466 257 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 ZNF438Q7Z4V0 828 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 CUZD1Q86UP6 607 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 DCBLD1Q8N8Z6 715 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 OR10G6Q8NH81 332 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 AGAP11Q8TF27 550 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 NEIL2Q969S2 332 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 HAUS8Q9BT25 410 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 MID1IP1Q9NPA3 183 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 GPRC5BQ9NZH0 403 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 SH2B3Q9UQQ2 575 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 U3KQA8 63 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 ASXL3Q9C0F0 2248 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 HEATR5BQ9P2D3 2071 aa20.99■□□□□ 0.95
VCPKMT-204ENST00000491402 PIPSLA2A3N6 862 aa20.98■□□□□ 0.95
VCPKMT-204ENST00000491402 EDF1O60869 148 aaKnown RBP20.98■□□□□ 0.95
VCPKMT-204ENST00000491402 UBXN7O94888 489 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms