RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 VSX2P58304 361 aaPredicted RBP13□□□□□ -0.33
CTDSP1-210ENST00000491064 PMP22Q01453 160 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 PLOD1Q02809 727 aaPredicted RBP13□□□□□ -0.33
CTDSP1-210ENST00000491064 TLE4Q04727 773 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 EEF1A2Q05639 463 aaKnown RBP13□□□□□ -0.33
CTDSP1-210ENST00000491064 ITIH4Q14624 930 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 WASHC2DQ5SRD0 308 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 CNSTQ6PJW8 725 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 RIPOR1Q6ZS17 1223 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 LAPTM4BQ86VI4 370 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 CHTF18Q8WVB6 975 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 CDKN2AIPNLQ96HQ2 116 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 IL17FQ96PD4 163 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 TBL1YQ9BQ87 522 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 MCCC2Q9HCC0 563 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 NLE1Q9NVX2 485 aaPredicted RBP13□□□□□ -0.33
CTDSP1-210ENST00000491064 CIDEBQ9UHD4 219 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 ABCA2Q9BZC7 2435 aa13□□□□□ -0.33
CTDSP1-210ENST00000491064 IGHV1-45A0A0A0MS14 117 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 HYKKA2RU49 373 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 OR5H15A6NDH6 313 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 IDSB3KWA1 339 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 H7C0C1 242 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 PSTPIP1O43586 416 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 SRPX2O60687 465 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 WFS1O76024 890 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ITGAMP11215 1152 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ATP5OP48047 213 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 UBASH3AP57075 661 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 GRB7Q14451 532 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 SPARCL1Q14515 664 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 PRPSAP1Q14558 356 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 SF1Q15637 639 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 DNAJC21Q5F1R6 531 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ANKRD20A2Q5SQ80 823 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ANKRD20A1Q5TYW2 823 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ANKRD20A3Q5VUR7 823 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 FAAH2Q6GMR7 532 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 FRMPD2BQ6IN97 320 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 PRMT9Q6P2P2 845 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 PACS1Q6VY07 963 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ACBD4Q8NC06 268 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 OR2L8Q8NGY9 312 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 SUN3Q8TAQ9 357 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ZUFSPQ96AP4 578 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ENKD1Q9H0I2 346 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 RIC8BQ9NVN3 520 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 FEZ2Q9UHY8 353 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 ZNF835Q9Y2P0 537 aa12.99□□□□□ -0.33
CTDSP1-210ENST00000491064 TARM1B6A8C7 271 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 APOC4-APOC2K7ER74 178 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 APOC2P02655 101 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 FBLP22087 321 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 CXCR2P25025 360 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 EMP2P54851 167 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 CSE1LP55060 971 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 Q6ZPB1 254 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 BBS12Q6ZW61 710 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 VRK3Q8IV63 474 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 SLC22A15Q8IZD6 547 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 AMER2Q8N7J2 671 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 MAGED4Q96JG8 741 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 STOX2Q9P2F5 926 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 IMPACTQ9P2X3 320 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 ZC3H7BQ9UGR2 993 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 MEMO1Q9Y316 297 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 FAM169AQ9Y6X4 670 aa12.98□□□□□ -0.33
CTDSP1-210ENST00000491064 INTS1Q8N201 2190 aaKnown RBP12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 LOC102723532A0A0G2JNH3 316 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 AKR1B10O60218 316 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 NRP2O60462 931 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 FKBP9O95302 570 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 OR56A5P0C7T3 313 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 MYBL2P10244 700 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 CD1EP15812 388 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 MARCKSL1P49006 195 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 PCOLCEQ15113 449 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 ABHD17BQ5VST6 288 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 NCCRP1Q6ZVX7 275 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 SPPL2CQ8IUH8 684 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 DCUN1D3Q8IWE4 304 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 KATNAL2Q8IYT4 538 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 THAP3Q8WTV1 239 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 STYXQ8WUJ0 223 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 C10orf90Q96M02 699 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 TREX2Q9BQ50 279 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 ANP32EQ9BTT0 268 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 GPAMQ9HCL2 828 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 KLK4Q9Y5K2 254 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 VPS13CQ709C8 3753 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 ACANP16112 2415 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
CTDSP1-210ENST00000491064 MAP1AP78559 2803 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms