RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 CAND1Q86VP6 1230 aaKnown RBP7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 TBC1D21Q8IYX1 336 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 DSELQ8IZU8 1212 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 DNAJC22Q8N4W6 341 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 ZBTB2Q8N680 514 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 AMER2Q8N7J2 671 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 ENDOVQ8N8Q3 282 aaKnown RBP7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 PPHLN1Q8NEY8 458 aaKnown RBP7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 OR5K2Q8NHB8 316 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 COG1Q8WTW3 980 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 FAM136AQ96C01 138 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 CATSPER2Q96P56 530 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 FCRL4Q96PJ5 515 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 ADNPQ9H2P0 1102 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 CATSPERZQ9NTU4 200 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 STOX2Q9P2F5 926 aaPredicted RBP7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 PLAAQ9Y263 795 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 NEU2Q9Y3R4 380 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 PCDHGA6Q9Y5G7 932 aa7.05□□□□□ -1.28
PRPF4B-208ENST00000490653 CSMD1Q96PZ7 3565 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 GOLGA6L6A8MZA4 724 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 GOLGA8MH3BSY2 632 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 PRMT5O14744 637 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ZNF185O15231 689 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 PRICKLE3O43900 615 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 CPNE3O75131 537 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 NIPSNAP2O75323 286 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 NDUFS3O75489 264 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ZNF189O75820 626 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 TMEM63AO94886 807 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 VAPBO95292 243 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 GAS8O95995 478 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 MT-ND3P03897 115 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 MCM3P25205 808 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 PSMB5P28074 263 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 PKLRP30613 574 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 COILP38432 576 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 BDKRB1P46663 353 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 MLLT10P55197 1068 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ITGA1P56199 1179 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 GPS1Q13098 491 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 FASTKQ14296 549 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 KCNJ11Q14654 390 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 SLC9A5Q14940 896 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 UGT8Q16880 541 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 CRTC2Q53ET0 693 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ACSBG2Q5FVE4 666 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 MLIPQ5VWP3 458 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 LYPLAL1Q5VWZ2 237 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ZNF449Q6P9G9 518 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 FAM198BQ6UWH4 519 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 CENPUQ71F23 418 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 SLC22A15Q8IZD6 547 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 SLC35F6Q8N357 371 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 RASGEF1CQ8N431 466 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ZNF655Q8N720 491 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 C19orf47Q8N9M1 422 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 C9orf43Q8TAL5 461 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ADAMTS17Q8TE56 1095 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 CPT1BQ92523 772 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 MAGOHBQ96A72 148 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 CLIP3Q96DZ5 547 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 SGSM3Q96HU1 749 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 BIRC8Q96P09 236 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 KIFC1Q9BW19 673 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 KCNF1Q9H3M0 494 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 AKTIPQ9H8T0 292 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 SYNPO2LQ9H987 977 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ACTR5Q9H9F9 607 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 EIF2B3Q9NR50 452 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 LATS2Q9NRM7 1088 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 SLC22A11Q9NSA0 550 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 TRMT1Q9NXH9 659 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 BFARQ9NZS9 450 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 DHCR7Q9UBM7 475 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 SERTAD3Q9UJW9 196 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 KCND3Q9UK17 655 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 POLHQ9Y253 713 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 CRYL1Q9Y2S2 319 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 PCM1Q15154 2024 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 TEP1Q99973 2627 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 ANKRD12Q6UB98 2062 aa7.04□□□□□ -1.28
PRPF4B-208ENST00000490653 A0A0J9YY10 115 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 A0A1W2PPV9 198 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 BLACEA4D250 179 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 A6NL46 340 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 C21orf140B9A014 251 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 E7EQ34 232 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 BANF1O75531 89 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 SLCO2B1O94956 709 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 MED26O95402 600 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 C1orf105O95561 183 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 KLK3P07288 261 aaPredicted RBP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 GSTM1P09488 218 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 SFTPCP11686 197 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 TPSB2P20231 275 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 ITGAXP20702 1163 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 CYP2A7P20853 494 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 MAGP20916 626 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms