RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MRGPRG-AS1Q2M3A8 158 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 UGT3A2Q3SY77 523 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 C1orf141Q5JVX7 400 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 SLC35D3Q5M8T2 416 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 SPDYCQ5MJ68 293 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 LCN1P1Q5VSP4 162 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 RPUSD3Q6P087 351 aaKnown RBP4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 PIGZQ86VD9 579 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 MMD2Q8IY49 270 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 NDUFAF2Q8N183 169 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 PI4KAP1Q8N8J0 262 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 OR4K1Q8NGD4 311 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 OR4C3Q8NH37 302 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 OR52N5Q8NH56 324 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 OLIG1Q8TAK6 271 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 HPSE2Q8WWQ2 592 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 CENPTQ96BT3 561 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 MAGED4Q96JG8 741 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 FAM20AQ96MK3 541 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 CPNE1Q99829 537 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 P2RY12Q9H244 342 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 PFDN4Q9NQP4 134 aa4.37□□□□□ -1.71
HMGB1P38-201ENST00000490557 KIF26BQ2KJY2 2108 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 A0A087WW49 117 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 A8MXE2 369 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 DKC1O60832 514 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 TBX10O75333 385 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 AP2A2O94973 939 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 NADKO95544 446 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 CD22P20273 847 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 AZGP1P25311 298 aaKnown RBP4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 PTGER4P35408 488 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 ALDH3A2P51648 485 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 ERVK11-1P61568 191 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 SP3Q02447 781 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 KRBOX4Q5JUW0 171 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 CCDC186Q7Z3E2 898 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 TLK2Q86UE8 772 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 LSMEM2Q8N112 164 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 MARVELD2Q8N4S9 558 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 CAMKVQ8NCB2 501 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 ARHGAP45Q92619 1136 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 DYRK2Q92630 601 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 SPSB1Q96BD6 273 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 GMPPAQ96IJ6 420 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 FEVQ99581 238 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 BAG1Q99933 345 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 MTMR12Q9C0I1 747 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 OR10A4Q9H209 315 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 CPVLQ9H3G5 476 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 FGF22Q9HCT0 170 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 ZNF71Q9NQZ8 489 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 OR6C2Q9NZP2 312 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 TXNDC16Q9P2K2 825 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 CCL27Q9Y4X3 112 aa4.36□□□□□ -1.71
HMGB1P38-201ENST00000490557 KIAA1210Q9ULL0 1709 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 RPS6KA5O75582 802 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 RAF1P04049 648 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 LIMK1P53667 647 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 POLR2LP62875 67 aaKnown RBP4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 TUBB2AQ13885 445 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 SGSM1Q2NKQ1 1148 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 ZFP69Q49AA0 526 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 PDLIM3Q53GG5 364 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 G2E3Q7L622 706 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 ADCK2Q7Z695 626 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 KIRREL3Q8IZU9 778 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 NOA1Q8NC60 698 aaKnown RBP4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 GPRC5AQ8NFJ5 357 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 DBF4BQ8NFT6 615 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 OR2T11Q8NH01 316 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 CTCFLQ8NI51 663 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 PIGBQ92521 554 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 WBP2Q969T9 261 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 FAM71F1Q96KD3 344 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 ART5Q96L15 291 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 MUS81Q96NY9 551 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 ASCL2Q99929 193 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 SLC25A23Q9BV35 468 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 TUBB2BQ9BVA1 445 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 OR2B2Q9GZK3 357 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 ZMYND12Q9H0C1 365 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 ERVMER34-1Q9H9K5 563 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 XAB2Q9HCS7 855 aaKnown RBP4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 EPHA6Q9UF33 1036 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 ANAPC5Q9UJX4 755 aa4.35□□□□□ -1.71
HMGB1P38-201ENST00000490557 PTGESO14684 152 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 AP5Z1O43299 807 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 FDPSP14324 419 aaKnown RBP4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 DARSP14868 501 aaKnown RBP4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 BMXP51813 675 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 LBX1P52954 281 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 RAD23AP54725 363 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 ITGA7Q13683 1181 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 HERC3Q15034 1050 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 PWWP2BQ6NUJ5 590 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 KCNE4Q8WWG9 221 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 PROX1Q92786 737 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 ATP6V1E2Q96A05 226 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 RADILQ96JH8 1075 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms