RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 C11orf63Q6NUN7 778 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 FRRS1Q6ZNA5 592 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 MAATS1Q7Z4T9 603 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 SLC39A11Q8N1S5 342 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 POM121L12Q8N7R1 296 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 LRRC15Q8TF66 581 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 LPGAT1Q92604 370 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 FAM20AQ96MK3 541 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 AGAP4Q96P64 663 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 CHCHD6Q9BRQ6 235 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 FAM49AQ9H0Q0 323 aaPredicted RBP3.07□□□□□ -1.92
HMGN1-218ENST00000490032 DPP3Q9NY33 737 aa3.07□□□□□ -1.92
HMGN1-218ENST00000490032 PTRH2Q9Y3E5 179 aaKnown RBP3.07□□□□□ -1.92
HMGN1-218ENST00000490032 LOC105371242A0A075B767 164 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 H0YAE9 185 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 O00370 1275 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 BCL10O95999 233 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 IGHEP01854 428 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 HAPLN1P10915 354 aaPredicted RBP3.06□□□□□ -1.92
HMGN1-218ENST00000490032 DARSP14868 501 aaKnown RBP3.06□□□□□ -1.92
HMGN1-218ENST00000490032 JAK1P23458 1154 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 TSFMP43897 325 aaKnown RBP3.06□□□□□ -1.92
HMGN1-218ENST00000490032 IGSF11Q5DX21 431 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 TMEM211Q6ICI0 200 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 LEKR1Q6ZMV7 388 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 ZNF595Q8IYB9 648 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 AQP11Q8NBQ7 271 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 OR10S1Q8NGN2 331 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 SLAMF9Q96A28 289 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 SPDL1Q96EA4 605 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 SLC45A3Q96JT2 553 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 MTMR12Q9C0I1 747 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 RARRES3Q9UL19 164 aa3.06□□□□□ -1.92
HMGN1-218ENST00000490032 A0A1W2PNU3 283 aaPredicted RBP3.05□□□□□ -1.92
HMGN1-218ENST00000490032 A6NCN8 305 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 PI4K2BG5E9Z4 385 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 CEACAM4O75871 244 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 KRT33AO76009 404 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 IGHV2-70P01814 119 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 ITIH1P19827 911 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 GCH1P30793 250 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 HOXD13P35453 343 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 PEX6Q13608 980 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 TEX19Q8NA77 164 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 THAP8Q8NA92 274 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 MCUQ8NE86 351 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 C11orf45Q8TAV5 145 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 ZNF622Q969S3 477 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGN1-218ENST00000490032 SPACA9Q96E40 222 aaPredicted RBP3.05□□□□□ -1.92
HMGN1-218ENST00000490032 TIGD1Q96MW7 591 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 SPAG5Q96R06 1193 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 OVOL2Q9BRP0 275 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 RPP25Q9BUL9 199 aaKnown RBP3.05□□□□□ -1.92
HMGN1-218ENST00000490032 TEX12Q9BXU0 123 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 GNB4Q9HAV0 340 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 C19orf25Q9UFG5 118 aaPredicted RBP3.05□□□□□ -1.92
HMGN1-218ENST00000490032 ABT1Q9ULW3 272 aaKnown RBP3.05□□□□□ -1.92
HMGN1-218ENST00000490032 WIPI2Q9Y4P8 454 aa3.05□□□□□ -1.92
HMGN1-218ENST00000490032 NEMP2A6NFY4 417 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 ASB14A6NK59 587 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 SHISA7A6NL88 538 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 SRRM5B3KS81 715 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 MEIS2O14770 477 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 ARPC2O15144 300 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 ALDH3A2P51648 485 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 CDH13P55290 713 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 EPS8Q12929 822 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 NOTUMQ6P988 496 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 FAM198BQ6UWH4 519 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 SLC47A2Q86VL8 602 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 MMD2Q8IY49 270 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 C17orf53Q8N3J3 647 aaPredicted RBP3.04□□□□□ -1.92
HMGN1-218ENST00000490032 MINDY1Q8N5J2 469 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 PIGBQ92521 554 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 NSUN4Q96CB9 384 aaKnown RBP3.04□□□□□ -1.92
HMGN1-218ENST00000490032 C4orf45Q96LM5 186 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 SFXN2Q96NB2 322 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 LPAR4Q99677 370 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 MRPL1Q9BYD6 325 aaKnown RBP3.04□□□□□ -1.92
HMGN1-218ENST00000490032 GHITMQ9H3K2 345 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 OPA3Q9H6K4 179 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 CHST11Q9NPF2 352 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 SLC35C2Q9NQQ7 365 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 PADI2Q9Y2J8 665 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 ATRXP46100 2492 aa3.04□□□□□ -1.92
HMGN1-218ENST00000490032 A0A1W2PPQ1 181 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 ACOD1A6NK06 481 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 TEX28O15482 410 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 ERAL1O75616 437 aaKnown RBP3.03□□□□□ -1.92
HMGN1-218ENST00000490032 HPRP00739 348 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 CSH1P0DML2 217 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 CSH2P0DML3 217 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 MPZP25189 248 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 STAT2P52630 851 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 XGP55808 180 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 HNRNPKP61978 463 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGN1-218ENST00000490032 KLC1Q07866 573 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 BAATQ14032 418 aaPredicted RBP3.03□□□□□ -1.92
HMGN1-218ENST00000490032 TAB1Q15750 504 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 EXT1Q16394 746 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms