RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ESR1P03372 595 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 FMO4P31512 558 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 DEKP35659 375 aaKnown RBP11.32□□□□□ -0.6
SRSF4-204ENST00000489898 MLLT10P55197 1068 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 RPS15P62841 145 aaKnown RBP11.32□□□□□ -0.6
SRSF4-204ENST00000489898 CUL1Q13616 776 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 PRTGQ2VWP7 1150 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 NKAIN1Q4KMZ8 207 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 PAQR7Q86WK9 346 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 OR4N4Q8N0Y3 316 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 FBXO15Q8NCQ5 510 aaPredicted RBP11.32□□□□□ -0.6
SRSF4-204ENST00000489898 CFAP61Q8NHU2 1237 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 MAIP1Q8WWC4 291 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 SEC14L1Q92503 715 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 FKBP10Q96AY3 582 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 PANX3Q96QZ0 392 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 SMAD5Q99717 465 aaKnown RBP11.32□□□□□ -0.6
SRSF4-204ENST00000489898 DHRS4Q9BTZ2 278 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 ZBTB20Q9HC78 741 aaPredicted RBP11.32□□□□□ -0.6
SRSF4-204ENST00000489898 FBXO6Q9NRD1 293 aaPredicted RBP11.32□□□□□ -0.6
SRSF4-204ENST00000489898 SPATA7Q9P0W8 599 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
SRSF4-204ENST00000489898 PLCL2Q9UPR0 1127 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 CRYL1Q9Y2S2 319 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 CSAG2Q9Y5P2 127 aa11.32□□□□□ -0.6
SRSF4-204ENST00000489898 CNTRLQ7Z7A1 2325 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 IGLV3-12A0A075B6K2 115 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 A0A1W2PQ72 361 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 CES2O00748 559 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 P2RX6O15547 441 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 ALOX12BO75342 701 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 USP1O94782 785 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 GAS8O95995 478 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 PKMP14618 531 aaKnown RBP11.31□□□□□ -0.6
SRSF4-204ENST00000489898 SKIV2L2P42285 1042 aaKnown RBP11.31□□□□□ -0.6
SRSF4-204ENST00000489898 FNTAP49354 379 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 PGGT1BP53609 377 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 KCNC4Q03721 635 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 CTBP1Q13363 440 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 CRYMQ14894 314 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 NKG7Q16617 165 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 KLHL38Q2WGJ6 581 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 RNF187Q5TA31 235 aaPredicted RBP11.31□□□□□ -0.6
SRSF4-204ENST00000489898 SLC6A19Q695T7 634 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 PTRHD1Q6GMV3 140 aaKnown RBP11.31□□□□□ -0.6
SRSF4-204ENST00000489898 NEPROQ6NW34 567 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 FIGLAQ6QHK4 219 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 OTOAQ7RTW8 1153 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 MCATQ8IVS2 390 aaKnown RBP11.31□□□□□ -0.6
SRSF4-204ENST00000489898 CNTN4Q8IWV2 1026 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 ZNF480Q8WV37 535 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 KCNJ9Q92806 393 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 MAGOHBQ96A72 148 aaKnown RBP11.31□□□□□ -0.6
SRSF4-204ENST00000489898 PBKQ96KB5 322 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 TCF12Q99081 682 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 MIPEPQ99797 713 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 DDX47Q9H0S4 455 aaKnown RBP11.31□□□□□ -0.6
SRSF4-204ENST00000489898 INTS10Q9NVR2 710 aaKnown RBP11.31□□□□□ -0.6
SRSF4-204ENST00000489898 IKZF3Q9UKT9 509 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 SRPK3Q9UPE1 567 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 HS3ST3B1Q9Y662 390 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 AP1M2Q9Y6Q5 423 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 ADGRG4Q8IZF6 3080 aa11.31□□□□□ -0.6
SRSF4-204ENST00000489898 ZGRF1Q86YA3 2104 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 A0A1B0GX78 115 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 E7ENX8 843 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 GFYI3L273 518 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 DSCR3O14972 297 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 NDUFS3O75489 264 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 SLC16A8O95907 504 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 KLK3P07288 261 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 IMPA1P29218 277 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 SOX8P57073 446 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 DCDP81605 110 aaKnown RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 TAP2Q03519 686 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 Q0VFX4 171 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 PTK6Q13882 451 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 DHX34Q14147 1143 aaKnown RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 TMED2Q15363 201 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 DCAF10Q5QP82 559 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 RBM20Q5T481 1227 aaKnown RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 MRNIPQ6NTE8 343 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 TLDC1Q6P9B6 456 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 NEK10Q6ZWH5 1172 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 GSTA5Q7RTV2 222 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 PIWIL4Q7Z3Z4 852 aaKnown RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 AMER3Q8N944 861 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 PPFIBP2Q8ND30 876 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 RAD51AP1Q96B01 352 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 PWWP2AQ96N64 755 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 PKP4Q99569 1192 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 BARD1Q99728 777 aaKnown RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 MCMBPQ9BTE3 642 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 SLC25A23Q9BV35 468 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 RAB11FIP5Q9BXF6 653 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 ZNF552Q9H707 407 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-204ENST00000489898 WDR54Q9H977 334 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
SRSF4-204ENST00000489898 XAB2Q9HCS7 855 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms