RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PAX7P23759 505 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ACP1P24666 158 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 DNAJB1P25685 340 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CCND3P30281 292 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CDC25CP30307 473 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SRP54P61011 504 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 POLR2LP62875 67 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SORDQ00796 357 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 GALK2Q01415 458 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 KIF5AQ12840 1032 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TMED1Q13445 227 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PDE7AQ13946 482 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MXD4Q14582 209 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 INPP5JQ15735 1006 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 HIST2H2ACQ16777 129 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SMTNL2Q2TAL5 461 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ANXA2RQ3ZCQ2 193 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SYTL3Q4VX76 610 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 C1orf185Q5T7R7 199 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 NOTUMQ6P988 496 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CYB5D1Q6P9G0 228 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MACC1Q6ZN28 852 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 RBM43Q6ZSC3 357 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TOM1L2Q6ZVM7 507 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PRSS42Q7Z5A4 293 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SYVN1Q86TM6 617 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TBC1D26Q86UD7 250 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 VASH2Q86V25 355 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 NBPF5PQ86XG9 351 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 IQCF2Q8IXL9 164 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ZCCHC7Q8N3Z6 543 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 OR4N2Q8NGD1 307 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 OR8J1Q8NGP2 316 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 B4GALNT2Q8NHY0 566 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ELP5Q8TE02 316 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 SELENOMQ8WWX9 145 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 THRSPQ92748 146 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 KAT2BQ92831 832 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ATOH1Q92858 354 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 RIT1Q92963 219 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 EME1Q96AY2 570 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ORAI1Q96D31 301 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 THOC3Q96J01 351 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 LRRC3BQ96PB8 259 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 GCOM2Q9BZD3 368 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 NACAP1Q9BZK3 213 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM117Q9H0C3 514 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 AAMDCQ9H7C9 122 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 EPB41L5Q9HCM4 733 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF304Q9HCX3 659 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 MYNNQ9NPC7 610 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 EQTNQ9NQ60 294 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 RBM28Q9NW13 759 aaKnown RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 COPG2Q9UBF2 871 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 DNPEPQ9ULA0 475 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 PROCRQ9UNN8 238 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 KIF3AQ9Y496 699 aa3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM184BQ9Y519 407 aaPredicted RBP3.08□□□□□ -1.92
DEPDC1-204ENST00000489862 CCDC144AA2RUR9 1427 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 IFT172Q9UG01 1749 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SPATA31A5Q5VU36 1347 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 PHLPP2Q6ZVD8 1323 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 EMSYQ7Z589 1322 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SPATA31A7Q8IWB4 1347 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CHD2O14647 1828 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 KIR2DS5A0A0G2JLQ3 304 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 XKRY2A2RUG3 117 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CTAGE15A4D2H0 777 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CXorf65A6NEN9 183 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 A6NNC1 897 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 H0YC42 278 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 KIR2DS3K7RE56 304 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 ADGRB1O14514 1584 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 VCYO14598 125 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 ANGPT2O15123 496 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 FCGR3BO75015 233 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 ERLIN1O75477 346 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF821O75541 412 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 PIK3C2GO75747 1445 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SERPING1P05155 500 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CTAGE8P0CG41 777 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CHRNB1P11230 501 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 AKR1A1P14550 325 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 HOXB2P14652 356 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SRD5A1P18405 259 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 HOXD10P28358 340 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 PTPN6P29350 595 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 HSPA1LP34931 641 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 PCGF2P35227 344 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 COMPP49747 757 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 OVGP1Q12889 678 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 DPYSQ14117 519 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 RFTN1Q14699 578 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 PTPRCAPQ14761 206 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 PTGR1Q14914 329 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 IMMTQ16891 758 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF585BQ52M93 769 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 RIPPLY2Q5TAB7 128 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 TXNRD3NBQ6F5E7 133 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms