RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 LRRC61Q9BV99 259 aa20.95■□□□□ 0.94
SMC4-221ENST00000489573 ARMCX1Q9P291 453 aa20.95■□□□□ 0.94
SMC4-221ENST00000489573 ZNF624Q9P2J8 865 aaPredicted RBP20.95■□□□□ 0.94
SMC4-221ENST00000489573 CEP192Q8TEP8 1941 aa20.95■□□□□ 0.94
SMC4-221ENST00000489573 MANBAO00462 879 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 WFS1O76024 890 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 KRT6AP02538 564 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 KRT6BP04259 564 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 KRT6CP48668 564 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 AFF3P51826 1226 aaKnown RBP20.94■□□□□ 0.94
SMC4-221ENST00000489573 UBAP2LQ14157 1087 aaKnown RBP20.94■□□□□ 0.94
SMC4-221ENST00000489573 CPSF6Q16630 551 aaKnown RBP eCLIP20.94■□□□□ 0.94
SMC4-221ENST00000489573 PRRT3Q5FWE3 981 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 LYSMD4Q5XG99 296 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 PMS2CLQ68D20 193 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 C2orf73Q8N5S3 287 aaPredicted RBP20.94■□□□□ 0.94
SMC4-221ENST00000489573 HMGCLL1Q8TB92 370 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 NEIL2Q969S2 332 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 TUBGCP3Q96CW5 907 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 NRTNQ99748 197 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 HAUS8Q9BT25 410 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 AKTIPQ9H8T0 292 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 RIC8BQ9NVN3 520 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 SNX6Q9UNH7 406 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 ICKQ9UPZ9 632 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 CACNA1IQ9P0X4 2223 aa20.94■□□□□ 0.94
SMC4-221ENST00000489573 PRAMEF33A0A0G2JMD5 474 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 ULK1O75385 1050 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 SLC2A4P14672 509 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 HNF4AP41235 474 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 SLC19A1P41440 591 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 CSNK1EP49674 416 aaKnown RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 C21orf59P57076 290 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 SRSF5Q13243 272 aaKnown RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 C1orf61Q13536 156 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 DOC2AQ14183 400 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 ABRAXAS2Q15018 415 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 ZRSR2Q15696 482 aaKnown RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 TBCCQ15814 346 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 LACTB2Q53H82 288 aaPredicted RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 TMEM198Q66K66 360 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 GRHL2Q6ISB3 625 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 IYDQ6PHW0 289 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 SLCO4C1Q6ZQN7 724 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 TMPRSS11BQ86T26 416 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 OR2L8Q8NGY9 312 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 USP7Q93009 1102 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 CATSPER2Q96P56 530 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 CCDC106Q9BWC9 280 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 PCBD2Q9H0N5 130 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 XKR8Q9H6D3 395 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 FBXO4Q9UKT5 387 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 NCOR1O75376 2440 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 ABCA7Q8IZY2 2146 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 OR5K4A6NMS3 321 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 CASP2P42575 452 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 DHPSP49366 369 aaPredicted RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 HNRNPH2P55795 449 aaKnown RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 BNIP1Q12981 228 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 E2F2Q14209 437 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 KRT72Q14CN4 511 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 ELOCQ15369 112 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 CHSY3Q70JA7 882 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 LINC01555Q8NAE3 123 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 SLC5A11Q8WWX8 675 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 SH3KBP1Q96B97 665 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 PTCD3Q96EY7 689 aaKnown RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 ELOVL6Q9H5J4 265 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 ZNF490Q9ULM2 529 aaPredicted RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 G3BP2Q9UN86 482 aaKnown RBP20.93■□□□□ 0.94
SMC4-221ENST00000489573 SH2B3Q9UQQ2 575 aa20.93■□□□□ 0.94
SMC4-221ENST00000489573 TRBV23OR9-2A0A075B6M9 112 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 KIR2DS5A0A0G2JLQ3 304 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 A0A0G2JNG1 304 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 KIR2DS3K7RE56 304 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 UBDO15205 165 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 LBPP18428 481 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 CD22P20273 847 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 DMTNQ08495 405 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 KIR2DS5Q14953 304 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 TEAD4Q15561 434 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 SPRED3Q2MJR0 410 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 ATG9BQ674R7 924 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 TRIM48Q8IWZ4 208 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 OR2T11Q8NH01 316 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 WDR34Q96EX3 536 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 HBEGFQ99075 208 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 EHD1Q9H4M9 534 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 ZNF385DQ9H6B1 395 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 SPASTQ9UBP0 616 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 TAC3Q9UHF0 121 aa20.92■□□□□ 0.94
SMC4-221ENST00000489573 A0A1W2PPV9 198 aa20.91■□□□□ 0.94
SMC4-221ENST00000489573 CAPN14A8MX76 684 aa20.91■□□□□ 0.94
SMC4-221ENST00000489573 PRR5-ARHGAP8B1AHC4 643 aa20.91■□□□□ 0.94
SMC4-221ENST00000489573 SLC28A1O00337 649 aa20.91■□□□□ 0.94
SMC4-221ENST00000489573 PRR35P0CG20 571 aa20.91■□□□□ 0.94
SMC4-221ENST00000489573 XRCC1P18887 633 aaPredicted RBP20.91■□□□□ 0.94
SMC4-221ENST00000489573 VARSP26640 1264 aaKnown RBP20.91■□□□□ 0.94
SMC4-221ENST00000489573 SHMT2P34897 504 aa20.91■□□□□ 0.94
SMC4-221ENST00000489573 SGO1Q5FBB7 561 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms