RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 EURLQ9NYK6 297 aa12.99□□□□□ -0.33
LMO4-203ENST00000489303 RELNP78509 3460 aa12.99□□□□□ -0.33
LMO4-203ENST00000489303 UBR5O95071 2799 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 PABPN1LA6NDY0 278 aaKnown RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 ARHGEF33A8MVX0 844 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 K7EM74 188 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 MYO1CO00159 1063 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 FANCGO15287 622 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 CCNDBP1O95273 360 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 SYF2O95926 243 aaKnown RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 CD63P08962 238 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 RAB40ALP0C0E4 278 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 RPA3P35244 121 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 RORAP35398 523 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 RPL21P46778 160 aaKnown RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 KCNAB2Q13303 367 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 TSTA3Q13630 321 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 IGFBP7Q16270 282 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 TCTE1Q5JU00 501 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 FIGLAQ6QHK4 219 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 ZNF517Q6ZMY9 492 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 GALNT7Q86SF2 657 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 MCATQ8IVS2 390 aaKnown RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 IGDCC3Q8IVU1 814 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 FAM20CQ8IXL6 584 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 CPNE9Q8IYJ1 553 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 ZNF655Q8N720 491 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 FBXO15Q8NCQ5 510 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 GIMAP7Q8NHV1 300 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 PROKR1Q8TCW9 393 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 CD200R1Q8TD46 325 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 DLG3Q92796 817 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 PWWP2AQ96N64 755 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 NDNQ99608 321 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 SLC30A3Q99726 388 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 MIPEPQ99797 713 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 ERP44Q9BS26 406 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 SPRTNQ9H040 489 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 EPN3Q9H201 632 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 AKIRIN1Q9H9L7 192 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 UTP6Q9NYH9 597 aaKnown RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 ZFATQ9P243 1243 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 GPN3Q9UHW5 284 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 CORO1CQ9ULV4 474 aaPredicted RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 SNX7Q9UNH6 387 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 PADI2Q9Y2J8 665 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 KLHL20Q9Y2M5 609 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 UTP11Q9Y3A2 253 aaKnown RBP12.98□□□□□ -0.33
LMO4-203ENST00000489303 TEX264Q9Y6I9 313 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 COL12A1Q99715 3063 aa12.98□□□□□ -0.33
LMO4-203ENST00000489303 PRICKLE3O43900 615 aaPredicted RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 AHSGP02765 367 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 FURINP09958 794 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 NR1D1P20393 614 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 MCM3P25205 808 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 GRIA3P42263 894 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 GABRA4P48169 554 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 PNLIPRP1P54315 467 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 ARSFP54793 590 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 CKAP4Q07065 602 aaKnown RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 FRG1Q14331 258 aaKnown RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 PTCHD3Q3KNS1 767 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 TEDDM1Q5T9Z0 273 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 STEAP4Q687X5 459 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 RHBDD2Q6NTF9 364 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 UBE2R2Q712K3 238 aaPredicted RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 ANKMY2Q8IV38 441 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 MYO1HQ8N1T3 1032 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 ENDOVQ8N8Q3 282 aaKnown RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 GPATCH11Q8N954 259 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 TTC29Q8NA56 475 aaPredicted RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 OR2L3Q8NG85 312 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 MCOLN3Q8TDD5 553 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 ASB11Q8WXH4 323 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 THAP4Q8WY91 577 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 PKP4Q99569 1192 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 SELENOSQ9BQE4 189 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 DHRS4Q9BTZ2 278 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 NLNQ9BYT8 704 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 RAB17Q9H0T7 212 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 DPH5Q9H2P9 285 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 MRPS30Q9NP92 439 aaKnown RBP12.97□□□□□ -0.33
LMO4-203ENST00000489303 WHRNQ9P202 907 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 TUBD1Q9UJT1 453 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 MAN2B2Q9Y2E5 1009 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 MED16Q9Y2X0 877 aa12.97□□□□□ -0.33
LMO4-203ENST00000489303 GFYI3L273 518 aa12.96□□□□□ -0.33
LMO4-203ENST00000489303 RAD51CO43502 376 aa12.96□□□□□ -0.33
LMO4-203ENST00000489303 SRPX2O60687 465 aaPredicted RBP12.96□□□□□ -0.33
LMO4-203ENST00000489303 C8GP07360 202 aa12.96□□□□□ -0.33
LMO4-203ENST00000489303 HIST1H2AGP0C0S8 130 aaPredicted RBP12.96□□□□□ -0.33
LMO4-203ENST00000489303 ERGP11308 486 aa12.96□□□□□ -0.33
LMO4-203ENST00000489303 PIM1P11309 404 aaPredicted RBP12.96□□□□□ -0.33
LMO4-203ENST00000489303 HIST1H2ADP20671 130 aa12.96□□□□□ -0.33
LMO4-203ENST00000489303 ALAS2P22557 587 aa12.96□□□□□ -0.33
LMO4-203ENST00000489303 PSMB5P28074 263 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms