RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NECTIN4Q96NY8 510 aa3.11□□□□□ -1.91
RFC4-213ENST00000489028 AGAP3Q96P47 875 aa3.11□□□□□ -1.91
RFC4-213ENST00000489028 GPR88Q9GZN0 384 aa3.11□□□□□ -1.91
RFC4-213ENST00000489028 K7ENM7 598 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 FPGTO14772 594 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 GLRA3O75311 464 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 CDK2AP2O75956 126 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 NXPH2O95156 264 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 TRUB2O95900 331 aaKnown RBP3.1□□□□□ -1.91
RFC4-213ENST00000489028 RAB40ALP0C0E4 278 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 CYP11B2P19099 503 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 CD27P26842 260 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 PTGER4P35408 488 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 HNF4AP41235 474 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 CSNK2BP67870 215 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 IFI35P80217 286 aaPredicted RBP3.1□□□□□ -1.91
RFC4-213ENST00000489028 NECTIN1Q15223 517 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 PDLIM3Q53GG5 364 aaPredicted RBP3.1□□□□□ -1.91
RFC4-213ENST00000489028 GARNL3Q5VVW2 1013 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 PRR27Q6MZM9 219 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 C11orf63Q6NUN7 778 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 UGT3A1Q6NUS8 523 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 MFSD12Q6NUT3 480 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 GPRC5AQ8NFJ5 357 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 OR13C3Q8NGS6 347 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 ZNF519Q8TB69 540 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 FAM222BQ8WU58 562 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 TEKT4Q8WW24 435 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 SLCO2A1Q92959 643 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 KRT12Q99456 494 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 TRIM51Q9BSJ1 452 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 CCDC106Q9BWC9 280 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 DGCR6LQ9BY27 220 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 UBXN6Q9BZV1 441 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 MIS12Q9H081 205 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 TLE6Q9H808 572 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 Q9H8V8 135 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 ANKZF1Q9H8Y5 726 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 OR6C2Q9NZP2 312 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 CPSF2Q9P2I0 782 aaKnown RBP3.1□□□□□ -1.91
RFC4-213ENST00000489028 PPIEQ9UNP9 301 aaKnown RBP3.1□□□□□ -1.91
RFC4-213ENST00000489028 WDR83OSQ9Y284 106 aa3.1□□□□□ -1.91
RFC4-213ENST00000489028 hCG_1809904A0A1W2PP81 198 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 A0A1W2PPE2 198 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 A0A1W2PPK0 400 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 A0A1W2PR64 198 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.09□□□□□ -1.91
RFC4-213ENST00000489028 EPM2AB3EWF7 344 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 PTGESO14684 152 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 MAGEC1O60732 1142 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 GATA1P15976 413 aaPredicted RBP3.09□□□□□ -1.91
RFC4-213ENST00000489028 ZNF10P21506 573 aaPredicted RBP3.09□□□□□ -1.91
RFC4-213ENST00000489028 UGT1A4P22310 534 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 CSTF2P33240 577 aaKnown RBP eCLIP3.09□□□□□ -1.91
RFC4-213ENST00000489028 NNMTP40261 264 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 MTHFRP42898 656 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 LIG4P49917 911 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 LBX1P52954 281 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 ITGA7Q13683 1181 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 EXT1Q16394 746 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 C2CD6Q53TS8 623 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 SLC35D3Q5M8T2 416 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 BRINP3Q76B58 766 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 CAMKMTQ7Z624 323 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 LRRTM1Q86UE6 522 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 OR10Q1Q8NGQ4 319 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 GATAD1Q8WUU5 269 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 APOBEC4Q8WW27 367 aaKnown RBP3.09□□□□□ -1.91
RFC4-213ENST00000489028 ARHGAP45Q92619 1136 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 OMA1Q96E52 524 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 THOC1Q96FV9 657 aaKnown RBP3.09□□□□□ -1.91
RFC4-213ENST00000489028 LINC00615Q96LM1 132 aaPredicted RBP3.09□□□□□ -1.91
RFC4-213ENST00000489028 SEPHS2Q99611 448 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 DCTN5Q9BTE1 182 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 APOL6Q9BWW8 343 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 PITPNM3Q9BZ71 974 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 CNOT10Q9H9A5 744 aaKnown RBP3.09□□□□□ -1.91
RFC4-213ENST00000489028 ANAPC2Q9UJX6 822 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 SMAD5-AS1Q9Y6J3 95 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 RPS6KL1Q9Y6S9 549 aa3.09□□□□□ -1.91
RFC4-213ENST00000489028 MYH15Q9Y2K3 1946 aa3.09□□□□□ -1.92
RFC4-213ENST00000489028 SOCS3O14543 225 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 ARPC2O15144 300 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 FIBPO43427 364 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 PSMD10O75832 226 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 VTNP04004 478 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 ABCB1P08183 1280 aaPredicted RBP3.08□□□□□ -1.92
RFC4-213ENST00000489028 NR2F1P10589 423 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 CD22P20273 847 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 LHCGRP22888 699 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 GATA2P23769 480 aaPredicted RBP3.08□□□□□ -1.92
RFC4-213ENST00000489028 CCR10P46092 362 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 GSCP56915 257 aaPredicted RBP3.08□□□□□ -1.92
RFC4-213ENST00000489028 UBXN2AP68543 259 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 MTF1Q14872 753 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 VWC2Q2TAL6 325 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 MCMDC2Q4G0Z9 681 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 GLIPR1L2Q4G1C9 344 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 TRIM65Q6PJ69 517 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms