RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 MCOLN3Q8TDD5 553 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 DCAKDQ8WVC6 231 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 FCRL4Q96PJ5 515 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 CTRCQ99895 268 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 PDE7BQ9NP56 450 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 SOHLH2Q9NX45 425 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 FETUBQ9UGM5 382 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 PILRAQ9UKJ1 303 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 PCDHB11Q9Y5F2 797 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 NPEPPSL1A6NEC2 478 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 CDC7O00311 574 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 HCRTR1O43613 425 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 TIAF1O95411 115 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 ALDOAP04075 364 aaKnown RBP17.95■□□□□ 0.46
PTCD3-217ENST00000488801 LIPCP11150 499 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 CD1DP15813 335 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 SLC26A3P40879 764 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 SLC12A2P55011 1212 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 TBPL1P62380 186 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 VSNL1P62760 191 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 YBX1P67809 324 aaKnown RBP17.95■□□□□ 0.46
PTCD3-217ENST00000488801 CDKL1Q00532 357 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 FOXM1Q08050 763 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 CLN3Q13286 438 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 BMPR2Q13873 1038 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 GPR19Q15760 415 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 ST3GAL2Q16842 350 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 WDR93Q6P2C0 686 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 CCDC91Q7Z6B0 441 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 ADAMTSL2Q86TH1 951 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 DNAJC22Q8N4W6 341 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 PPFIBP2Q8ND30 876 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 OR8K5Q8NH50 307 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 TCTN2Q96GX1 697 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 SGPP1Q9BX95 441 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 KLHL25Q9H0H3 589 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 SLC6A20Q9NP91 592 aa17.95■□□□□ 0.46
PTCD3-217ENST00000488801 IGKV1-8A0A0C4DH67 115 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 OR2A25A4D2G3 310 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 TARM1B6A8C7 271 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 CCDC166P0CW27 439 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 ZNF28P17035 718 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 CRABP2P29373 138 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 GMPRP36959 345 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 GRIA3P42263 894 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 DLG1Q12959 904 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 MAP7Q14244 749 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 TSNQ15631 228 aaKnown RBP17.94■□□□□ 0.46
PTCD3-217ENST00000488801 TMTC4Q5T4D3 741 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 AGTRAPQ6RW13 159 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 SUSD1Q6UWL2 747 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 ZFAND4Q86XD8 727 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 PPP1R3BQ86XI6 285 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 SYTL1Q8IYJ3 562 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 CENPLQ8N0S6 344 aaPredicted RBP17.94■□□□□ 0.46
PTCD3-217ENST00000488801 OR56A3Q8NH54 315 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 PTERQ96BW5 349 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 FBXL8Q96CD0 374 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 ZNF285Q96NJ3 590 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 ANKMY1Q9P2S6 941 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 RARRES3Q9UL19 164 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 OARD1Q9Y530 152 aa17.94■□□□□ 0.46
PTCD3-217ENST00000488801 STMND1H3BQB6 276 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 SYF2O95926 243 aaKnown RBP17.93■□□□□ 0.46
PTCD3-217ENST00000488801 INHBAP08476 426 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 GCGRP47871 477 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 ARL4DP49703 201 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 SERPINB9P50453 376 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 ATP6V0D1P61421 351 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 SLC29A2Q14542 456 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 SF1Q15637 639 aaKnown RBP17.93■□□□□ 0.46
PTCD3-217ENST00000488801 UAP1Q16222 522 aaPredicted RBP17.93■□□□□ 0.46
PTCD3-217ENST00000488801 MROH9Q5TGP6 573 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 ICE2Q659A1 982 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 ZNF425Q6IV72 752 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 FIGLAQ6QHK4 219 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 RNF44Q7L0R7 432 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 SPACA3Q8IXA5 215 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 OR1L3Q8NH93 324 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 KCNE4Q8WWG9 221 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 ZUFSPQ96AP4 578 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 MIPEPQ99797 713 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 DPH1Q9BZG8 443 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 CCDC177Q9NQR7 707 aaPredicted RBP17.93■□□□□ 0.46
PTCD3-217ENST00000488801 SNX15Q9NRS6 342 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 IGSF5Q9NSI5 407 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 TAC3Q9UHF0 121 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 KLHL20Q9Y2M5 609 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 SCN3AQ9NY46 2000 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 LOC400499M0QZD8 3231 aa17.93■□□□□ 0.46
PTCD3-217ENST00000488801 EXOC1LA0A1B0GW35 172 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 NRP2O60462 931 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 STK17BO94768 372 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 CNTFP26441 200 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 SERPINB8P50452 374 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 PRDX1Q06830 199 aaKnown RBP17.92■□□□□ 0.46
PTCD3-217ENST00000488801 NAA25Q14CX7 972 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 OR4D1Q15615 310 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 PWWP2BQ6NUJ5 590 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 ADGRD1Q6QNK2 874 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms