RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 KRT6AP02538 564 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 KRT6BP04259 564 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 KRT6CP48668 564 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 MTTPP55157 894 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 CLDN2P57739 230 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 BLOC1S3Q6QNY0 202 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 SYTL1Q8IYJ3 562 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 PGAM4Q8N0Y7 254 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 TFGQ92734 400 aaPredicted RBP19.6■□□□□ 0.73
NECAB3-213ENST00000488489 MSANTD3Q96H12 275 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 CDRT15Q96T59 188 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 UHRF1Q96T88 793 aaPredicted RBP19.6■□□□□ 0.73
NECAB3-213ENST00000488489 NRTNQ99748 197 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 ACPTQ9BZG2 426 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 POMPQ9Y244 141 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 CA5BQ9Y2D0 317 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 PLEKHM1Q9Y4G2 1056 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 SLC28A1O00337 649 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 G6PDP11413 515 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 ACP5P13686 325 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 TBPL1P62380 186 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 IRF8Q02556 426 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 GRIK2Q13002 908 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 IL23RQ5VWK5 629 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 UNC5DQ6UXZ4 953 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 LRRC56Q8IYG6 542 aaPredicted RBP19.6■□□□□ 0.73
NECAB3-213ENST00000488489 FBXW8Q8N3Y1 598 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 PROKR1Q8TCW9 393 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 KLHL4Q9C0H6 718 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 ACTL8Q9H568 366 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 C2orf42Q9NWW7 574 aa19.6■□□□□ 0.73
NECAB3-213ENST00000488489 E7ENX8 843 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 H0Y8X5 98 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 CHRNB1P11230 501 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 PIM1P11309 404 aaPredicted RBP19.59■□□□□ 0.73
NECAB3-213ENST00000488489 SLC2A4P14672 509 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 JUPP14923 745 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 IL12AP29459 219 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 TAP2Q03519 686 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 DOC2AQ14183 400 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 PDCD4Q53EL6 469 aaKnown RBP19.59■□□□□ 0.73
NECAB3-213ENST00000488489 SFT2D3Q587I9 215 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 XKR6Q5GH73 641 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 PTCRAQ6ISU1 281 aaPredicted RBP19.59■□□□□ 0.73
NECAB3-213ENST00000488489 RNF175Q8N4F7 328 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 NUDT8Q8WV74 236 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 SELENOMQ8WWX9 145 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 ASB12Q8WXK4 309 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 CCDC124Q96CT7 223 aaKnown RBP19.59■□□□□ 0.73
NECAB3-213ENST00000488489 PPP3R2Q96LZ3 170 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 TRIM4Q9C037 500 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 ELOVL6Q9H5J4 265 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 PLAGL1Q9UM63 463 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 SNX6Q9UNH7 406 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 WDR37Q9Y2I8 494 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 PCDHGA7Q9Y5G6 932 aa19.59■□□□□ 0.73
NECAB3-213ENST00000488489 SLC22A3O75751 556 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 IL9P15248 144 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 RPL38P63173 70 aaKnown RBP19.58■□□□□ 0.73
NECAB3-213ENST00000488489 MLF2Q15773 248 aaPredicted RBP19.58■□□□□ 0.73
NECAB3-213ENST00000488489 LIPJQ5W064 366 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 ZNF687Q8N1G0 1237 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 NEIL2Q969S2 332 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 IL17FQ96PD4 163 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 BTBD1Q9H0C5 482 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 MAP10Q9P2G4 905 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 SH2B3Q9UQQ2 575 aa19.58■□□□□ 0.73
NECAB3-213ENST00000488489 POLR3HQ9Y535 204 aaPredicted RBP19.58■□□□□ 0.73
NECAB3-213ENST00000488489 MRASO14807 208 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 CASQ2O14958 399 aaPredicted RBP19.58■□□□□ 0.72
NECAB3-213ENST00000488489 ANKRD28O15084 1053 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 UQCRBP14927 111 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 NPPBP16860 134 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 GNPDA1P46926 289 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 CLCNKAP51800 687 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 POLE2P56282 527 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 PCDH1Q08174 1060 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 PRKG2Q13237 762 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 RCAN2Q14206 197 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 KIAA0040Q15053 153 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 RBBP5Q15291 538 aaKnown RBP19.58■□□□□ 0.72
NECAB3-213ENST00000488489 IMPG1Q17R60 797 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 PYCR3Q53H96 274 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 HABP4Q5JVS0 413 aaKnown RBP19.58■□□□□ 0.72
NECAB3-213ENST00000488489 LPCAT4Q643R3 524 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 FRG2Q64ET8 278 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 CYP20A1Q6UW02 462 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 SUSD1Q6UWL2 747 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 LAYNQ6UX15 382 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 BNC2Q6ZN30 1099 aaPredicted RBP19.58■□□□□ 0.72
NECAB3-213ENST00000488489 FRG2BQ96QU4 278 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 FGF22Q9HCT0 170 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 ITM2CQ9NQX7 267 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 PRPF19Q9UMS4 504 aaKnown RBP19.58■□□□□ 0.72
NECAB3-213ENST00000488489 KCNK6Q9Y257 313 aa19.58■□□□□ 0.72
NECAB3-213ENST00000488489 USP34Q70CQ2 3546 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 SCAMP1O15126 338 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 UGDHO60701 494 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 DMPKQ09013 629 aa19.57■□□□□ 0.72
NECAB3-213ENST00000488489 CEACAM7Q14002 265 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms