RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 BCKDHAP12694 445 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 SPINT3P49223 89 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 TMEM115Q12893 351 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PPP1R8Q12972 351 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 LRP8Q14114 963 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PDGFRLQ15198 375 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 SF1Q15637 639 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 GPAT3Q53EU6 434 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 SLC44A4Q53GD3 710 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 MPP7Q5T2T1 576 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 CBARPQ8N350 705 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 LRIG1Q96JA1 1093 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 ARMC7Q9H6L4 198 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 KLHL3Q9UH77 587 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 DAPK2Q9UIK4 370 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PCDHB3Q9Y5E6 796 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 EDDM13A0A1B0GTR0 161 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 MYL12BO14950 172 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 SLC16A5O15375 505 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 POP7O75817 140 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PRDX3P30048 256 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PCYT1AP49585 367 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 ALDH3A2P51648 485 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 UGT2B15P54855 530 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 DEF8Q6ZN54 512 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 CHST15Q7LFX5 561 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 TMEM25Q86YD3 366 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 OR14C36Q8NHC7 312 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 EXOSC8Q96B26 276 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PCBD2Q9H0N5 130 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PTBP2Q9UKA9 531 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 KPNA4O00629 521 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 MED26O95402 600 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 ZBTB11O95625 1053 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 IFNW1P05000 195 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 MYL12AP19105 171 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 C18orf21Q32NC0 220 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PDE12Q6L8Q7 609 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 PPP4R4Q6NUP7 873 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 NEK5Q6P3R8 708 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 GALNT13Q8IUC8 556 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 C7orf61Q8IZ16 206 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 TRAM1L1Q8N609 369 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 TTC29Q8NA56 475 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF483Q8TF39 744 aaPredicted RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 GLYATL1Q969I3 302 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 TEFMQ96QE5 360 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 SEC14L3Q9UDX4 400 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 FBXO10Q9UK96 956 aa11.5□□□□□ -0.57
TRA2B-214ENST00000487615 CNOT11Q9UKZ1 510 aaKnown RBP11.5□□□□□ -0.57
TRA2B-214ENST00000487615 HNRNPCL2B2RXH8 293 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 EIF3FO00303 357 aaPredicted RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 SAP18O00422 153 aaKnown RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 GPR39O43194 453 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 RGS10O43665 173 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 DLGAP3O95886 979 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 RB1P06400 928 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 IFI44LQ53G44 452 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ATAT1Q5SQI0 421 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 PRAMEF14Q5SWL7 426 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 PRAMEF13Q5VWM6 474 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 TYW3Q6IPR3 259 aaKnown RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 C16orf62Q7Z3J2 963 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 CDK20Q8IZL9 346 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 AMER2Q8N7J2 671 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 FAM81AQ8TBF8 368 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 Q96MT0 163 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 MCMBPQ9BTE3 642 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 TMEM181Q9P2C4 612 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 TESMINQ9Y4I5 508 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 NPIPB15A6NHN6 443 aaPredicted RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ZW10O43264 779 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 TSPAN6O43657 245 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 OR1F1O43749 312 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 PDYNP01213 254 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 CTSKP43235 329 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 TUBA4AP68366 448 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 RGS1Q08116 209 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 KRR1Q13601 381 aaKnown RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 NOXRED1Q6NXP6 359 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 MACC1Q6ZN28 852 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 BNIPLQ7Z465 357 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 KBTBD2Q8IY47 623 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 SRFBP1Q8NEF9 429 aaKnown RBP11.49□□□□□ -0.57
TRA2B-214ENST00000487615 OR52J3Q8NH60 311 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 GIPC3Q8TF64 312 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 XAGE5Q8WWM1 108 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 TADA1Q96BN2 335 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ZHX1-C8orf76Q96EF9 292 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 KCNH6Q9H252 994 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 CRISPLD1Q9H336 500 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 CWH43Q9H720 699 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 FZD4Q9ULV1 537 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 ZNF232Q9UNY5 417 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 PRSS51A0A1B0GVH4 220 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 MMP20O60882 483 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 RFPL2O75678 378 aa11.49□□□□□ -0.57
TRA2B-214ENST00000487615 OCM2P0CE71 109 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms