RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SLC29A3Q9BZD2 475 aa11.93□□□□□ -0.5
SREBF1-215ENST00000487401 FAM114A2Q9NRY5 505 aa11.93□□□□□ -0.5
SREBF1-215ENST00000487401 SLC22A11Q9NSA0 550 aa11.93□□□□□ -0.5
SREBF1-215ENST00000487401 SPATA7Q9P0W8 599 aa11.93□□□□□ -0.5
SREBF1-215ENST00000487401 PPP2R2CQ9Y2T4 447 aa11.93□□□□□ -0.5
SREBF1-215ENST00000487401 FITM1A5D6W6 292 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 AGPSO00116 658 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 CTSVO60911 334 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 AGFG2O95081 481 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 ONECUT2O95948 504 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 EIF2S1P05198 315 aaKnown RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 ERVK-10P10266 1014 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 GP1BBP13224 206 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 PKMP14618 531 aaKnown RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 ITGAXP20702 1163 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 OGNP20774 298 aaKnown RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 MMP11P24347 488 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 PSMB5P28074 263 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 CMPK1P30085 196 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 RPA3P35244 121 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 MAGEA6P43360 314 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 GCGRP47871 477 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 OR1D4P47884 311 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 TSTA3Q13630 321 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 DHX34Q14147 1143 aaKnown RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 KCNJ11Q14654 390 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 TTLL9Q3SXZ7 439 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 ACSBG2Q5FVE4 666 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 IRAK1BP1Q5VVH5 260 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 ZADH2Q8N4Q0 377 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 METTL27Q8N6F8 245 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 OR2L3Q8NG85 312 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 SMPDL3AQ92484 453 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 PBKQ96KB5 322 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 ZNF285Q96NJ3 590 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 NAP1L3Q99457 506 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 WDR54Q9H977 334 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 GRPEL1Q9HAV7 217 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 LRRC4CQ9HCJ2 640 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 INTS10Q9NVR2 710 aaKnown RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 ZC3H7BQ9UGR2 993 aaKnown RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 FBXL4Q9UKA2 621 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 NXT1Q9UKK6 140 aaKnown RBP11.92□□□□□ -0.5
SREBF1-215ENST00000487401 KLK4Q9Y5K2 254 aa11.92□□□□□ -0.5
SREBF1-215ENST00000487401 FLNCQ14315 2725 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 A0A0J9YVX5 310 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 HYKKA2RU49 373 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 BLACEA4D250 179 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 KRT87PA6NCN2 255 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ZNF839A8K0R7 811 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 MATN4O95460 622 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 CATP04040 527 aaKnown RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 MLNP12872 115 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ITGA3P26006 1051 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 HSD17B2P37059 387 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 SOX8P57073 446 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 OCA2Q04671 838 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 AIMP2Q13155 320 aaKnown RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 FASTKQ14296 549 aaKnown RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 RBBP7Q16576 425 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 NKG7Q16617 165 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 KLHL38Q2WGJ6 581 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 PLEKHN1Q494U1 663 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 PRR30Q53SZ7 412 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ANKRD22Q5VYY1 191 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 TTC27Q6P3X3 843 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 SHISA6Q6ZSJ9 500 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 CAND1Q86VP6 1230 aaKnown RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 CILP2Q8IUL8 1156 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 IQCKQ8N0W5 287 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 Q8NA96 180 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 MCUQ8NE86 351 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 OR2A1Q8NGT9 310 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ZNF669Q96BR6 464 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ACAT2Q9BWD1 397 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ILKAPQ9H0C8 392 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 SLC26A1Q9H2B4 701 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 CCDC68Q9H2F9 335 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 SOX17Q9H6I2 414 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ZNF552Q9H707 407 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 XAB2Q9HCS7 855 aaKnown RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ZNF304Q9HCX3 659 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 ENAMQ9NRM1 1142 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 UTP6Q9NYH9 597 aaKnown RBP11.91□□□□□ -0.5
SREBF1-215ENST00000487401 GALPQ9UBC7 116 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 B3GNT3Q9Y2A9 372 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 JRKLQ9Y4A0 524 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 MAU2Q9Y6X3 613 aa11.91□□□□□ -0.5
SREBF1-215ENST00000487401 FAM237BA0A1B0GVD1 139 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 A0A1W2PPV9 198 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 ARHGEF33A8MVX0 844 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 GOLGA8MH3BSY2 632 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 MASP2O00187 686 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 VPS26AO75436 327 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 USP1O94782 785 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 CCNDBP1O95273 360 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 COILP38432 576 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-215ENST00000487401 CARSP49589 748 aaKnown RBP11.9□□□□□ -0.5
SREBF1-215ENST00000487401 CCZ1BP86790 482 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms