RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 MYO1CO00159 1063 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 PSIP1O75475 530 aaKnown RBP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 ZIC2O95409 532 aaPredicted RBP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 TCP1P17987 556 aaKnown RBP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 CHRM3P20309 590 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 NR1D1P20393 614 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 GRIA3P42263 894 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 CLCN7P51798 805 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 RRADP55042 308 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 ARHGAP19Q14CB8 494 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 LONRF1Q17RB8 773 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 TTLL9Q3SXZ7 439 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 RNASEH2BQ5TBB1 312 aaKnown RBP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 MRPL14Q6P1L8 145 aaKnown RBP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 TAX1BP1Q86VP1 789 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 HPS6Q86YV9 775 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 AGGF1Q8N302 714 aaeCLIP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 OR2L3Q8NG85 312 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 OR2A1Q8NGT9 310 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 CALML6Q8TD86 181 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 FKBP10Q96AY3 582 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 SPSB2Q99619 263 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 FAM114A2Q9NRY5 505 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 IFT80Q9P2H3 777 aaPredicted RBP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 DHCR7Q9UBM7 475 aaKnown RBP13.83□□□□□ -0.2
CLDN11-207ENST00000486975 KLHL20Q9Y2M5 609 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 MED16Q9Y2X0 877 aa13.83□□□□□ -0.2
CLDN11-207ENST00000486975 SNRNP200O75643 2136 aaKnown RBP13.82□□□□□ -0.2
CLDN11-207ENST00000486975 A0A1B0GX78 115 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 CTAGE9A4FU28 777 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 FITM1A5D6W6 292 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 ARHGEF33A8MVX0 844 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 EIF3FO00303 357 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-207ENST00000486975 SRPX2O60687 465 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-207ENST00000486975 IGHEP01854 428 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 CATP04040 527 aaKnown RBP13.82□□□□□ -0.2
CLDN11-207ENST00000486975 PDGFAP04085 211 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 ENO3P13929 434 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-207ENST00000486975 HSD17B2P37059 387 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 PGDP52209 483 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 SSPNQ14714 243 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 KLHL38Q2WGJ6 581 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 ACSBG2Q5FVE4 666 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.82□□□□□ -0.2
CLDN11-207ENST00000486975 C1orf189Q5VU69 101 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 C2orf73Q8N5S3 287 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-207ENST00000486975 TEX19Q8NA77 164 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 OR9A1PQ8NGU1 263 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 OR2Y1Q8NGV0 311 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 NACC2Q96BF6 587 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 FAM167BQ9BTA0 163 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 SLC25A23Q9BV35 468 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 IRAK4Q9NWZ3 460 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 IL1RAPL1Q9NZN1 696 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 GALPQ9UBC7 116 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 NDOR1Q9UHB4 597 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 PCYOX1Q9UHG3 505 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 GPN3Q9UHW5 284 aaPredicted RBP13.82□□□□□ -0.2
CLDN11-207ENST00000486975 FAM169AQ9Y6X4 670 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 FER1L5A0AVI2 2057 aa13.82□□□□□ -0.2
CLDN11-207ENST00000486975 OR2A25A4D2G3 310 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 DSCR3O14972 297 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 ZNF185O15231 689 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 CTSVO60911 334 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 ALBP02768 609 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 FOLR3P41439 243 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 SLC1A2P43004 574 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 CCL11P51671 97 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 CHAF1BQ13112 559 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 CTBP1Q13363 440 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 ATP1A4Q13733 1029 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 PTK6Q13882 451 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 GRM7Q14831 915 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 PPP1R7Q15435 360 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 FAM69BQ5VUD6 431 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 MLIPQ5VWP3 458 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 ZNF549Q6P9A3 640 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 RNF44Q7L0R7 432 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 MRGPREQ86SM8 312 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLDN11-207ENST00000486975 GIMAP7Q8NHV1 300 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 SMPDL3AQ92484 453 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 PTERQ96BW5 349 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 FAM136AQ96C01 138 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 NAT9Q9BTE0 207 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 SLC26A1Q9H2B4 701 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 CCDC68Q9H2F9 335 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 WDR54Q9H977 334 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 SLC22A11Q9NSA0 550 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 C20orf96Q9NUD7 363 aaPredicted RBP13.81□□□□□ -0.2
CLDN11-207ENST00000486975 ANKMY1Q9P2S6 941 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 FBXO5Q9UKT4 447 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 G3BP2Q9UN86 482 aaKnown RBP13.81□□□□□ -0.2
CLDN11-207ENST00000486975 PTRH2Q9Y3E5 179 aaKnown RBP13.81□□□□□ -0.2
CLDN11-207ENST00000486975 MAD1L1Q9Y6D9 718 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 NBASA2RRP1 2371 aa13.81□□□□□ -0.2
CLDN11-207ENST00000486975 KRT87PA6NCN2 255 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms