RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	CLEC4C	Q8WTT0	213 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	OIT3	Q8WWZ8	545 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	LRTOMT	Q8WZ04	291 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	OR8D1	Q8WZ84	308 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	INPP5D	Q92835	1189 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	WBP1	Q96G27	269 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	BTN2A3P	Q96KV6	586 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF578	Q96N58	590 aa	Predicted RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	GSDMA	Q96QA5	445 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SPAG5	Q96R06	1193 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TUBB6	Q9BUF5	446 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MIS12	Q9H081	205 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	POPDC2	Q9HBU9	364 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	METTL14	Q9HCE5	456 aa	Known RBP	4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	RMND1	Q9NWS8	449 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SLC12A6	Q9UHW9	1150 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CNTN6	Q9UQ52	1028 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	NAALADL1	Q9UQQ1	740 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ATP6V1D	Q9Y5K8	247 aa		4.01	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CHD5	Q8TDI0	1954 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	KIR2DS5	A0A0G2JLQ3	304 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941		A0A1B0GVM2	712 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	NEMP2	A6NFY4	417 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941		F5H5T6	163 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	KIR2DS3	K7RE56	304 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TNFRSF13B	O14836	293 aa	Predicted RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MED7	O43513	233 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	RTN2	O75298	545 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SMC2	O95347	1197 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MOCS2	O96007	188 aa	Predicted RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	GP1BA	P07359	652 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CKMT1A	P12532	417 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PDGFRA	P16234	1089 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DGKA	P23743	735 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	NDUFS1	P28331	727 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	MAT2A	P31153	395 aa	Known RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	STK19	P49842	368 aa	Predicted RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PGGT1B	P53609	377 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SLC12A2	P55011	1212 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	UCN	P55089	124 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TLE3	Q04726	772 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CNTN1	Q12860	1018 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PNOC	Q13519	176 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DLG2	Q15700	870 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CNGA3	Q16281	694 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	C5orf22	Q49AR2	442 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ACCSL	Q4AC99	568 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	RABGAP1L	Q5R372	815 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	RAP1GAP2	Q684P5	730 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TAC4	Q86UU9	113 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ERICH1	Q86X53	443 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CCAR2	Q8N163	923 aa	Known RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF843	Q8N446	348 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF248	Q8NDW4	579 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	OR4C6	Q8NH72	309 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SPATA20	Q8TB22	786 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SNRNP27	Q8WVK2	155 aa	Known RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF606	Q8WXB4	792 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	NEUROG1	Q92886	237 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FAM149B1	Q96BN6	582 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	GRAMD1A	Q96CP6	724 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ALG14	Q96F25	216 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DHTKD1	Q96HY7	919 aa	Predicted RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SNX22	Q96L94	193 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PRMT1	Q99873	361 aa	Known RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	FEM1A	Q9BSK4	669 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	GOLPH3L	Q9H4A5	285 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	THAP9	Q9H5L6	903 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PREB	Q9HCU5	417 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	XPO7	Q9UIA9	1087 aa	Known RBP	4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SLC25A13	Q9UJS0	675 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SARDH	Q9UL12	918 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	OR51B4	Q9Y5P0	310 aa		4	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TLN1	Q9Y490	2541 aa	Known RBP	3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TENM4	Q6N022	2769 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	EME2	A4GXA9	379 aa	Predicted RBP	3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	TRIM49B	A6NDI0	452 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941		J3QKU1	62 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PSMA7	O14818	248 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SCAMP1	O15126	338 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SLC31A1	O15431	190 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SDC3	O75056	442 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CLDN11	O75508	207 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	SYF2	O95926	243 aa	Known RBP	3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CALCA	P01258	141 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	THEGL	P0DJG4	465 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	GIMD1	P0DJR0	217 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ALPPL2	P10696	532 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	ZNF18	P17022	549 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	HNRNPA2B1	P22626	353 aa	Known RBP	3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DUSP1	P28562	367 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	AKT2	P31751	481 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CCR1	P32246	355 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	CHRNA3	P32297	505 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	PPP1R2	P41236	205 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	AGTR2	P50052	363 aa		3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	DUSP3	P51452	185 aa	Predicted RBP	3.99	□□□□□ -1.77
SNRNP40-205	ENST00000486941	METAP1	P53582	386 aa		3.99	□□□□□ -1.77

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