RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 MYLIPQ8WY64 445 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 TIFAQ96CG3 184 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 APOLD1Q96LR9 279 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 ATG10Q9H0Y0 220 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 LINC00597Q9H2U6 94 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 RAD18Q9NS91 495 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 NFKBIL1Q9UBC1 381 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 RANBP2P49792 3224 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 PLXNA2O75051 1894 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 PER2O15055 1255 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 UGDHO60701 494 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 LEFTY1O75610 366 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 SLCO2B1O94956 709 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 GSNP06396 782 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 GSTM1P09488 218 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 HOXB6P17509 224 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 POLR2EP19388 210 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 ETV3P41162 512 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 HLCSP50747 726 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 GSTM4Q03013 218 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 ZNF33BQ06732 778 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 ABHD18Q0P651 414 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 ARHGAP15Q53QZ3 475 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 HENMT1Q5T8I9 393 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 LIPJQ5W064 366 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 NOXRED1Q6NXP6 359 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 ANKRD46Q86W74 232 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 C10orf111Q8N326 155 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 PNPT1Q8TCS8 783 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 REXO5Q96IC2 774 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 TCF25Q9BQ70 676 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 OSBPL10Q9BXB5 764 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 PCDH12Q9NPG4 1184 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 USE1Q9NZ43 259 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 GPRC5BQ9NZH0 403 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 UTS2RQ9UKP6 389 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 UPK3BL1B0FP48 263 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 UPK3BL2E5RIL1 263 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 QSOX1O00391 747 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 GNGT2O14610 69 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 SERPINA1P01009 418 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 TIMP2P16035 220 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 TTKP33981 857 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 SHMT2P34897 504 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 CDKN2CP42773 168 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 IST1P53990 364 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 EPS8Q12929 822 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 CSTF3Q12996 717 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 MYBPC3Q14896 1274 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 ARSIQ5FYB1 569 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 LY6G5CQ5SRR4 150 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 OTOP2Q7RTS6 562 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 NETO1Q8TDF5 533 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 BADQ92934 168 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 ISOC1Q96CN7 298 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 EGLN2Q96KS0 407 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 MRGPRX3Q96LB0 322 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 FAM83CQ9BQN1 747 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 ZSCAN5AQ9BUG6 496 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 RIOK2Q9BVS4 552 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 TOR3AQ9H497 397 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 IFT80Q9P2H3 777 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 TBC1D14Q9P2M4 693 aa17.46■□□□□ 0.39
PDLIM7-207ENST00000486828 OR2AG2A6NM03 316 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 FADS2P1A8MWK0 482 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 TTC34A8MYJ7 566 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 RFXANKO14593 260 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 PSIP1O75475 530 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 LRATO95237 230 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 B3GALT4O96024 378 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 SYN1P17600 705 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 PTPN2P17706 415 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 PPP2R2BQ00005 443 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 IRF8Q02556 426 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 MTAPQ13126 283 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 ZNF77Q15935 545 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 DPY19L1Q2PZI1 675 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 ADHFE1Q8IWW8 467 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 ZCCHC7Q8N3Z6 543 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 PJA1Q8NG27 643 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 NELL1Q92832 810 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 LIN28AQ9H9Z2 209 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 IRAK3Q9Y616 596 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 RECQL5O94762 991 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 CD22P20273 847 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 PRPS1L1P21108 318 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 MAP4P27816 1152 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 KIR3DL1P43629 444 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 ERVFC1P60507 584 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 PMS2P3Q13401 168 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 LAPTM5Q13571 262 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 CBX2Q14781 532 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 ZNF648Q5T619 568 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 TTC23Q5W5X9 447 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 OR4F3Q6IEY1 312 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 RAVER1Q8IY67 606 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 OR5K1Q8NHB7 308 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 CYB5D2Q8WUJ1 264 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 CLP1Q92989 425 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 RBM4BQ9BQ04 359 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms