RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 COPB1P53618 953 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 LIMK2P53671 638 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 OR1D5P58170 312 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 IL2P60568 153 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 SSTP61278 116 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 RHOAP61586 193 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 CDC20Q12834 499 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 CHAF1BQ13112 559 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 IKZF1Q13422 519 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 PNOCQ13519 176 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 EFR3AQ14156 821 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF460Q14592 562 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 LASP1Q14847 261 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 ARHGAP44Q17R89 818 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 SMU1Q2TAY7 513 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 DEFB109BQ30KR1 87 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 RBM20Q5T481 1227 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 ATXN7L2Q5T6C5 722 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 OTUD1Q5VV17 481 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 PRAMEF13Q5VWM6 474 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 THOC7Q6I9Y2 204 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 RWDD4Q6NW29 188 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 SASS6Q6UVJ0 657 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 LRIG3Q6UXM1 1119 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 NLRC3Q7RTR2 1065 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 MTDHQ86UE4 582 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 STK32CQ86UX6 486 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 TMEM200AQ86VY9 491 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 RFX6Q8HWS3 928 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 NLGN4XQ8N0W4 816 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 SPARTQ8N0X7 666 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 RCBTB1Q8NDN9 531 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 NLGN4YQ8NFZ3 816 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 OR4D9Q8NGE8 314 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 BCAS4Q8TDM0 211 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 OR1E3Q8WZA6 343 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 ZUFSPQ96AP4 578 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 HMCESQ96FZ2 354 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 C7orf34Q96L11 122 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 NUDT22Q9BRQ3 303 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 GSDMCQ9BYG8 508 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 UNKQ9C0B0 810 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 REXO4Q9GZR2 422 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 TMEM168Q9H0V1 697 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 CARD9Q9H257 536 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 DPH5Q9H2P9 285 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 HAUS4Q9H6D7 363 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 EPS8L2Q9H6S3 715 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 ACP6Q9NPH0 428 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 PRDM8Q9NQV8 689 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 EIF2B3Q9NR50 452 aaKnown RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 EHD3Q9NZN3 535 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 OGFRQ9NZT2 677 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 LRFN1Q9P244 771 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 KIF17Q9P2E2 1029 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 COQ6Q9Y2Z9 468 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 KCTD3Q9Y597 815 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 ACTL7AQ9Y615 435 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-209ENST00000486618 ABCA12Q86UK0 2595 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 CENPEQ02224 2701 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 ANKRD36A6QL64 1941 aa6.66□□□□□ -1.34
HDAC3-209ENST00000486618 C2CD3Q4AC94 2353 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 HIVEP3Q5T1R4 2406 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 OR6C74A6NCV1 312 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 TMEM202A6NGA9 273 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 NCF1BA6NI72 391 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 NCF1CA8MVU1 366 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 GTPBP1O00178 669 aaKnown RBP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 KPNA5O15131 536 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 KDELR3O43731 214 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 SLC25A17O43808 307 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 SUSD5O60279 629 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 CIDEAO60543 219 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 RAMP2O60895 175 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 TMCC1O94876 653 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 KRT14P02533 472 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 KRT7P08729 469 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 CCNB1P14635 433 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 CD1CP29017 333 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 AKT1P31749 480 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 TRIM23P36406 574 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 MLLT10P55197 1068 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 BPIFB4P59827 614 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 VAMP2P63027 116 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 CSNK2BP67870 215 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 ABHD18Q0P651 414 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 ILF3Q12906 894 aaKnown RBP eCLIP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 CUL1Q13616 776 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 CYLC2Q14093 348 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 HABP2Q14520 560 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 NR1D2Q14995 579 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 TSTQ16762 297 aaKnown RBP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 UGP2Q16851 508 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 Q3ZCU0 254 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 PTPN20Q4JDL3 420 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 SFRP5Q5T4F7 317 aa6.65□□□□□ -1.34
HDAC3-209ENST00000486618 FAM102AQ5T9C2 384 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 RNASEH2BQ5TBB1 312 aaKnown RBP6.65□□□□□ -1.34
HDAC3-209ENST00000486618 HIST2H2BCQ6DN03 193 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms