RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 ZNF45Q02386 682 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 CDK10Q15131 360 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 SF1Q15637 639 aaKnown RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 TBC1D25Q3MII6 688 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 WSCD1Q658N2 575 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 VSTM1Q6UX27 236 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 ZNF101Q8IZC7 436 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 PROKR2Q8NFJ6 384 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 C10orf82Q8WW14 230 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 P2RY11Q96G91 374 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 BEX2Q9BXY8 128 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 PDGFDQ9GZP0 370 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 BEX1Q9HBH7 125 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TMX2Q9Y320 296 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 XIRP1Q702N8 1843 aaKnown RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 ASTN1O14525 1302 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 IRS2Q9Y4H2 1338 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TEX13CA0A0J9YWL9 993 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TBC1D3BA6NDS4 549 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TISP43B9A030 160 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 J3QLW9 94 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TLX3O43711 291 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 SLC16A8O95907 504 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 GKN3PP0CG01 181 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 ZNF19P17023 458 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TAL1P17542 331 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 GNAZP19086 355 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 AHCYP23526 432 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 HSPA7P48741 367 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 LBX1P52954 281 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 AIF1P55008 147 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 LCP2Q13094 533 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 SLC13A2Q13183 592 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TUSC3Q13454 348 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 DSG2Q14126 1118 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 PTGR1Q14914 329 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 NOMO1Q15155 1222 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 COL28A1Q2UY09 1125 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 BRSK1Q8TDC3 778 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 CASTOR1Q8WTX7 329 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 JPH3Q8WXH2 748 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 TMEM209Q96SK2 561 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TREX2Q9BQ50 279 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 GBA3Q9H227 469 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 ACP6Q9NPH0 428 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TRIM36Q9NQ86 728 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 NKX1-2Q9UD57 310 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 LRRC42Q9Y546 428 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TOGARAM1Q9Y4F4 1720 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 FAM237AA0A1B0GTK4 181 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 PDHXO00330 501 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 APOC3P02656 99 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 PRPS2P11908 318 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 ZNF16P17020 682 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 SLC1A2P43004 574 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 WNT3AP56704 352 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 ATXN7L3Q14CW9 347 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 NIPA1Q7RTP0 329 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 ARL14Q8N4G2 192 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 MAB21L3Q8N8X9 362 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 TMBIM1Q969X1 311 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 DUSP16Q9BY84 665 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 POLR2J3Q9H1A7 115 aaKnown RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 MKKSQ9NPJ1 570 aaPredicted RBP8.58□□□□□ -1.04
GABRE-209ENST00000486255 ARHGEF4Q9NR80 690 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 FBXW2Q9UKT8 454 aa8.58□□□□□ -1.04
GABRE-209ENST00000486255 ANKRD36CQ5JPF3 1778 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 TMEM150BA6NC51 233 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
GABRE-209ENST00000486255 FFAR2O15552 330 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 OR4F21O95013 312 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 ELFN1P0C7U0 828 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
GABRE-209ENST00000486255 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
GABRE-209ENST00000486255 PKMP14618 531 aaKnown RBP8.57□□□□□ -1.04
GABRE-209ENST00000486255 CHMP24386 653 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 CTBP2P56545 445 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 NOMO3P69849 1222 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 GRM3Q14832 879 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 ZNF792Q3KQV3 632 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 EARS2Q5JPH6 523 aaKnown RBP8.57□□□□□ -1.04
GABRE-209ENST00000486255 ARL9Q6T311 187 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 NETO2Q8NC67 525 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 REPS2Q8NFH8 660 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 FAM110BQ8TC76 370 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 ZNF641Q96N77 438 aaPredicted RBP8.57□□□□□ -1.04
GABRE-209ENST00000486255 GPR21Q99679 349 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 NDC1Q9BTX1 674 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 PCDHAC1Q9H158 963 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 GLOD4Q9HC38 313 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 WASF3Q9UPY6 502 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 PCDHGA8Q9Y5G5 932 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 ADAMTS3O15072 1205 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 INMTO95050 263 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 PIK3CBP42338 1070 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 PNLIPRP1P54315 467 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 LRRC37A5PQ49AS3 106 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 VTCN1Q7Z7D3 282 aa8.57□□□□□ -1.04
GABRE-209ENST00000486255 IQCHQ86VS3 1027 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms