RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 CTAGE9A4FU28 777 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 ZNF839A8K0R7 811 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 GOLGA8KD6RF30 607 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 E5RI56 91 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 GOLGA8TH3BQL2 631 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 MYO1CO00159 1063 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 NIPSNAP2O75323 286 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 KATNA1O75449 491 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 KLF7O75840 302 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 CEACAM4O75871 244 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 OR2B3O76000 313 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 HAUS5O94927 633 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 AHSGP02765 367 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 FURINP09958 794 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 PIM1P11309 404 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 PLA2G2AP14555 144 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 PVRP15151 417 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 PGAM1P18669 254 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 AGXTP21549 392 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 HRH2P25021 359 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 GRIA3P42263 894 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 PMS2P54278 862 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 DCDP81605 110 aaKnown RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 CTBP1Q13363 440 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 SF1Q15637 639 aaKnown RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 KLHL38Q2WGJ6 581 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 DEFB109BQ30KR1 87 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 FAM214AQ32MH5 1076 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 TTLL9Q3SXZ7 439 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 SPANXN3Q5MJ09 141 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 FCRL6Q6DN72 434 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 LCN10Q6JVE6 187 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 LRRC8EQ6NSJ5 796 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 HIBCHQ6NVY1 386 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 MRPL14Q6P1L8 145 aaKnown RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 C16orf46Q6P387 395 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 MED25Q71SY5 747 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 KCNMB4Q86W47 210 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 HPS6Q86YV9 775 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 MCATQ8IVS2 390 aaKnown RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 DENND6AQ8IWF6 608 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 SYTL1Q8IYJ3 562 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 PDIK1LQ8N165 341 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 ZBTB2Q8N680 514 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 TMEM102Q8N9M5 508 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 C2CD4AQ8NCU7 369 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 CFAP61Q8NHU2 1237 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 DLG3Q92796 817 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 N4BP2L2Q92802 583 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 MR1Q95460 341 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 ZNF669Q96BR6 464 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 CLIP3Q96DZ5 547 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 ABHD17AQ96GS6 310 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 GBP5Q96PP8 586 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 AARSD1Q9BTE6 412 aaKnown RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 SPRTNQ9H040 489 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 DDX47Q9H0S4 455 aaKnown RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 CHST8Q9H2A9 424 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 SLC26A1Q9H2B4 701 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 CCDC68Q9H2F9 335 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 FAM114A2Q9NRY5 505 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 C20orf96Q9NUD7 363 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 EURLQ9NYK6 297 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 GALPQ9UBC7 116 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 ANAPC2Q9UJX6 822 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 TCFL5Q9UL49 500 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 CORO1CQ9ULV4 474 aaPredicted RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 PCDHGA9Q9Y5G4 932 aaKnown RBP6.73□□□□□ -1.33
VPS50-218ENST00000485994 NFS1Q9Y697 457 aa6.73□□□□□ -1.33
VPS50-218ENST00000485994 FLNBO75369 2602 aaKnown RBP6.72□□□□□ -1.33
VPS50-218ENST00000485994 OR2A25A4D2G3 310 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 USP27XA6NNY8 438 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 E7ENX8 843 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 E7ESA3 106 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 MKRN2OSH3BPM6 223 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 GOLGA8MH3BSY2 632 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 J3QKU1 62 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 TP73O15350 636 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 SLC16A5O15375 505 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 ZSCAN9O15535 394 aaPredicted RBP6.72□□□□□ -1.33
VPS50-218ENST00000485994 HCRTR1O43613 425 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 ZBTB14O43829 449 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 KLHL41O60662 606 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 IGHEP01854 428 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 CATP04040 527 aaKnown RBP6.72□□□□□ -1.33
VPS50-218ENST00000485994 PRKAR1AP10644 381 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 MAGP20916 626 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 GABRB3P28472 473 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 SLC1A2P43004 574 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 CSE1LP55060 971 aaKnown RBP6.72□□□□□ -1.33
VPS50-218ENST00000485994 SOX8P57073 446 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 ABATP80404 500 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 TIAL1Q01085 375 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS50-218ENST00000485994 DR1Q01658 176 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 TAP2Q03519 686 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 PRDX1Q06830 199 aaKnown RBP6.72□□□□□ -1.33
VPS50-218ENST00000485994 DHX9Q08211 1270 aaKnown RBP6.72□□□□□ -1.33
VPS50-218ENST00000485994 CRYMQ14894 314 aa6.72□□□□□ -1.33
VPS50-218ENST00000485994 HSP90AA5PQ58FG0 334 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms