RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 MED16Q9Y2X0 877 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 CDC14CA4D256 554 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CTAGE15A4D2H0 777 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 TARM1B6A8C7 271 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 C9J4A7 227 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 GFYI3L273 518 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 TK2O00142 265 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 TP73O15350 636 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 ZSCAN9O15535 394 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CTAGE8P0CG41 777 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 ALAS2P22557 587 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 F8A1P23610 371 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 SSTR1P30872 391 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 GUCY2DQ02846 1103 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CDC20Q12834 499 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 LY6DQ14210 128 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 C1orf189Q5VU69 101 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 BORAQ6PGQ7 559 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 ADCK2Q7Z695 626 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CTAGE6Q86UF2 777 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 SLC26A11Q86WA9 606 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CTAGE4Q8IX94 777 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CTAGE3PQ8IX95 158 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 DSELQ8IZU8 1212 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 TTC29Q8NA56 475 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-205ENST00000485746 PPFIBP2Q8ND30 876 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 OR2L3Q8NG85 312 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 KIF18AQ8NI77 898 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 TTC9Q92623 222 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 DLG3Q92796 817 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 WBP1Q96G27 269 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 VPS39Q96JC1 886 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CCDC138Q96M89 665 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 SELENOSQ9BQE4 189 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 LRRC1Q9BTT6 524 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 GPR87Q9BY21 358 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CHRNA10Q9GZZ6 450 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 CHST8Q9H2A9 424 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 AKIRIN1Q9H9L7 192 aaPredicted RBP12.03□□□□□ -0.48
PTCD1-205ENST00000485746 PLAC1Q9HBJ0 212 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 MOCS1Q9NZB8 636 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 TAC3Q9UHF0 121 aa12.03□□□□□ -0.48
PTCD1-205ENST00000485746 A0A0J9YVX5 310 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 FAM95CA0A1B0GW59 222 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 SLC16A5O15375 505 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 PRICKLE3O43900 615 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-205ENST00000485746 CREG1O75629 220 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 SLC16A8O95907 504 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 EIF2S1P05198 315 aaKnown RBP12.02□□□□□ -0.49
PTCD1-205ENST00000485746 GSTA2P09210 222 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 FDXRP22570 491 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 PTPN4P29074 926 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 MAGEA4P43358 317 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 CCR10P46092 362 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 ARSFP54793 590 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 VSX2P58304 361 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-205ENST00000485746 ILF2Q12905 390 aaKnown RBP12.02□□□□□ -0.49
PTCD1-205ENST00000485746 SP140Q13342 867 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 PTCHD3Q3KNS1 767 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 TCTE1Q5JU00 501 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 MLIPQ5VWP3 458 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 FCRL6Q6DN72 434 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 SLC38A9Q8NBW4 561 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 FBXO15Q8NCQ5 510 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-205ENST00000485746 FBXO25Q8TCJ0 367 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 ZNF480Q8WV37 535 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 SEC14L1Q92503 715 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 MED8Q96G25 268 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 LRFN5Q96NI6 719 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 BBC3Q96PG8 261 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-205ENST00000485746 C17orf62Q9BQA9 187 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 DPH2Q9BQC3 489 aaPredicted RBP12.02□□□□□ -0.49
PTCD1-205ENST00000485746 DPH7Q9BTV6 452 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 ACTL8Q9H568 366 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 PARVBQ9HBI1 364 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 PCMTD2Q9NV79 361 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 MTRF1LQ9UGC7 380 aaKnown RBP12.02□□□□□ -0.49
PTCD1-205ENST00000485746 SNX7Q9UNH6 387 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 SRPK3Q9UPE1 567 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 ZZEF1O43149 2961 aa12.02□□□□□ -0.49
PTCD1-205ENST00000485746 A0A1W2PPV9 198 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 ESYT3A0FGR9 886 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 HCRTR1O43613 425 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 RAB40ALP0C0E4 278 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 ERGP11308 486 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 SFTPCP11686 197 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 GABRA4P48169 554 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 RPS18P62269 152 aaKnown RBP12.01□□□□□ -0.49
PTCD1-205ENST00000485746 DCDP81605 110 aaKnown RBP12.01□□□□□ -0.49
PTCD1-205ENST00000485746 TIAL1Q01085 375 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTCD1-205ENST00000485746 COL9A2Q14055 689 aaPredicted RBP12.01□□□□□ -0.49
PTCD1-205ENST00000485746 GRM7Q14831 915 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 TRADDQ15628 312 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 ATP1A1-AS1Q5TC04 95 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 ICE2Q659A1 982 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 CEP128Q6ZU80 1094 aa12.01□□□□□ -0.49
PTCD1-205ENST00000485746 ZC3HC1Q86WB0 502 aaKnown RBP12.01□□□□□ -0.49
PTCD1-205ENST00000485746 NKAPQ8N5F7 415 aaKnown RBP12.01□□□□□ -0.49
PTCD1-205ENST00000485746 ENDOVQ8N8Q3 282 aaKnown RBP12.01□□□□□ -0.49
PTCD1-205ENST00000485746 OR2A1Q8NGT9 310 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms