RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 B3GALNT1O75752 331 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 MT-ND3P03897 115 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 FGF5P12034 268 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 PSMB4P28070 264 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 CHRNA7P36544 502 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 MNDAP41218 407 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 THBS3P49746 956 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 KHKP50053 298 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 HTR6P50406 440 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 GSDMDP57764 484 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 ST8SIA6P61647 398 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 ZXDBP98169 803 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 KLC1Q07866 573 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 ILF2Q12905 390 aaKnown RBP3.79□□□□□ -1.8
FN1-222ENST00000485567 TRIM29Q14134 588 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 TAZQ16635 292 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 CTU2Q2VPK5 515 aaKnown RBP3.79□□□□□ -1.8
FN1-222ENST00000485567 C2orf76Q3KRA6 126 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 FUT11Q495W5 492 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 LACTB2Q53H82 288 aaPredicted RBP3.79□□□□□ -1.8
FN1-222ENST00000485567 C9orf57Q5W0N0 161 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 CASC4Q6P4E1 433 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 ZNF852Q6ZMS4 543 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 KCTD8Q6ZWB6 473 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 FOXP4Q8IVH2 680 aaPredicted RBP3.79□□□□□ -1.8
FN1-222ENST00000485567 NAGSQ8N159 534 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 UXS1Q8NBZ7 420 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 DBF4BQ8NFT6 615 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 OR2T12Q8NG77 320 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 GRHL3Q8TE85 626 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 ZNF473Q8WTR7 871 aaKnown RBP3.79□□□□□ -1.8
FN1-222ENST00000485567 NUDCD2Q8WVJ2 157 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 SNRNP40Q96DI7 357 aaKnown RBP3.79□□□□□ -1.8
FN1-222ENST00000485567 IGSF21Q96ID5 467 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 TRAF4Q9BUZ4 470 aaPredicted RBP3.79□□□□□ -1.8
FN1-222ENST00000485567 C1QTNF4Q9BXJ3 329 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 SLC2A11Q9BYW1 496 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 PANK2Q9BZ23 570 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 DNAJC17Q9NVM6 304 aaKnown RBP3.79□□□□□ -1.8
FN1-222ENST00000485567 CNIH4Q9P003 139 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 EPS15L1Q9UBC2 864 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 BLOC1S6Q9UL45 172 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 KNSTRNQ9Y448 316 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 JRKLQ9Y4A0 524 aa3.79□□□□□ -1.8
FN1-222ENST00000485567 PRAC2D3DTV9 90 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 MPHOSPH10O00566 681 aaKnown RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 FLRT2O43155 660 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 PPIP5K2O43314 1243 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SLC28A2O43868 658 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SNX3O60493 162 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 PRKRAO75569 313 aaKnown RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 PAPSS2O95340 614 aaPredicted RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 PIGNO95427 931 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 GSRP00390 522 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SNRNP70P08621 437 aaKnown RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 EPORP19235 508 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 MSH3P20585 1137 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 TNFRSF8P28908 595 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 CASP3P42574 277 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 FRKP42685 505 aaPredicted RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 KCNJ1P48048 391 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 FMO5P49326 533 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 DMPKQ09013 629 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 C17orf67Q0P5P2 114 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 AP1B1Q10567 949 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 ODF4Q2M2E3 257 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 ITPRIPL2Q3MIP1 535 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 LBHQ53QV2 105 aaPredicted RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 SIRPB2Q5JXA9 342 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SPDYCQ5MJ68 293 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 CORO6Q6QEF8 472 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 EXOC3L1Q86VI1 746 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 AMIGO1Q86WK6 493 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 TMEM139Q8IV31 216 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SIAH3Q8IW03 269 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 CLYBLQ8N0X4 340 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 AMER3Q8N944 861 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 SPC24Q8NBT2 197 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 OR4K1Q8NGD4 311 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 OR1J1Q8NGS3 322 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SEPT1Q8WYJ6 367 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 P2RX5Q93086 422 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SGF29Q96ES7 293 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 FAM71F1Q96KD3 344 aaPredicted RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 TSGA13Q96PP4 275 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 HNRNPABQ99729 332 aaKnown RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 PRRG4Q9BZD6 226 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 VPS33BQ9H267 617 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SNX25Q9H3E2 840 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 C6orf106Q9H6K1 298 aaPredicted RBP3.78□□□□□ -1.8
FN1-222ENST00000485567 PELI2Q9HAT8 420 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 SLCO1C1Q9NYB5 712 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 CACNG4Q9UBN1 327 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 DAPK2Q9UIK4 370 aa3.78□□□□□ -1.8
FN1-222ENST00000485567 EVPLQ92817 2033 aa3.77□□□□□ -1.81
FN1-222ENST00000485567 ARPC2O15144 300 aa3.77□□□□□ -1.81
FN1-222ENST00000485567 ST8SIA3O43173 380 aa3.77□□□□□ -1.81
FN1-222ENST00000485567 XPNPEP2O43895 674 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms