RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ADAMTS6Q9UKP5 1117 aa18.41■□□□□ 0.54
SNX17-206ENST00000484886 PLCL2Q9UPR0 1127 aa18.41■□□□□ 0.54
SNX17-206ENST00000484886 A0A1W2PPV9 198 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 CXorf49A8MYA2 514 aaPredicted RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 ZNF749O43361 778 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 PRICKLE3O43900 615 aaPredicted RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 HIST1H2AGP0C0S8 130 aaPredicted RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 ATXN8OSP0DMR3 200 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 ERGP11308 486 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 TCN2P20062 427 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 HIST1H2ADP20671 130 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 STX2P32856 288 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 GPX6P59796 221 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 CYP4F2P78329 520 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 ILF2Q12905 390 aaKnown RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 GPS2Q13227 327 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 NAA25Q14CX7 972 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 GLE1Q53GS7 698 aaKnown RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 TAF1BQ53T94 588 aaPredicted RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 ZC3H12BQ5HYM0 836 aaKnown RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 FCRL6Q6DN72 434 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 FAM199XQ6PEV8 388 aaPredicted RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 DNAJC22Q8N4W6 341 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 OR2A1Q8NGT9 310 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 CT55Q8WUE5 264 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 SNRNP27Q8WVK2 155 aaKnown RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 STARD8Q92502 1023 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 HIST1H2AHQ96KK5 128 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 CPNE1Q99829 537 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 HIST1H2AJQ99878 128 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 H2AFJQ9BTM1 129 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 SPRTNQ9H040 489 aaPredicted RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 PARVBQ9HBI1 364 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 MRPS30Q9NP92 439 aaKnown RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 ZDHHC18Q9NUE0 388 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 EURLQ9NYK6 297 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 TAC3Q9UHF0 121 aa18.4■□□□□ 0.54
SNX17-206ENST00000484886 DMGDHQ9UI17 866 aaKnown RBP18.4■□□□□ 0.54
SNX17-206ENST00000484886 CFAP47Q6ZTR5 3102 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 FAM159BA6NKW6 160 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 SLC16A5O15375 505 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 HCRTR1O43613 425 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 CCNDBP1O95273 360 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 HBQ1P09105 142 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 PRKAR1AP10644 381 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 SPTBP11277 2137 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 DNASE1L3Q13609 305 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 ZNF460Q14592 562 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 C16orf46Q6P387 395 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 CEP128Q6ZU80 1094 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 MCATQ8IVS2 390 aaKnown RBP18.39■□□□□ 0.53
SNX17-206ENST00000484886 ZNF655Q8N720 491 aaPredicted RBP18.39■□□□□ 0.53
SNX17-206ENST00000484886 PPM1NQ8N819 430 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 SLC38A9Q8NBW4 561 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 SEC14L1Q92503 715 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 ZUFSPQ96AP4 578 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 ALKBH8Q96BT7 664 aaKnown RBP18.39■□□□□ 0.53
SNX17-206ENST00000484886 SLC45A3Q96JT2 553 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 SLC12A9Q9BXP2 914 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 TRIM54Q9BYV2 358 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 LRRC4CQ9HCJ2 640 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 KCND3Q9UK17 655 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 PDE10AQ9Y233 779 aa18.39■□□□□ 0.53
SNX17-206ENST00000484886 MRPS18BQ9Y676 258 aaKnown RBP18.39■□□□□ 0.53
SNX17-206ENST00000484886 TARM1B6A8C7 271 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 E7ENX8 843 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 MEN1O00255 615 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 ZSCAN9O15535 394 aaPredicted RBP18.38■□□□□ 0.53
SNX17-206ENST00000484886 TSPAN12O95859 305 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 IMPA1P29218 277 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 GP5P40197 560 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 GABRA4P48169 554 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 TAS2R39P59534 338 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 MC1RQ01726 317 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 TAP2Q03519 686 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 COL9A2Q14055 689 aaPredicted RBP18.38■□□□□ 0.53
SNX17-206ENST00000484886 KBTBD12Q3ZCT8 623 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 MBOAT1Q6ZNC8 495 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 ADCK2Q7Z695 626 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 FBF1Q8TES7 1133 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 DLG3Q92796 817 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 TSPAN17Q96FV3 270 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 MED8Q96G25 268 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 CCDC138Q96M89 665 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 SELENOSQ9BQE4 189 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 DPH7Q9BTV6 452 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 FAM129AQ9BZQ8 928 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 AKIRIN1Q9H9L7 192 aaPredicted RBP18.38■□□□□ 0.53
SNX17-206ENST00000484886 CCDC177Q9NQR7 707 aaPredicted RBP18.38■□□□□ 0.53
SNX17-206ENST00000484886 TXLNGQ9NUQ3 528 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 ARL15Q9NXU5 204 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 STOX2Q9P2F5 926 aaPredicted RBP18.38■□□□□ 0.53
SNX17-206ENST00000484886 MTO1Q9Y2Z2 717 aaKnown RBP18.38■□□□□ 0.53
SNX17-206ENST00000484886 AP1M2Q9Y6Q5 423 aa18.38■□□□□ 0.53
SNX17-206ENST00000484886 NBEAQ8NFP9 2946 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 EIF4E1BA6NMX2 242 aaKnown RBP18.37■□□□□ 0.53
SNX17-206ENST00000484886 ERVH48-1M5A8F1 160 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 NKX2-8O15522 239 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 CTSBP07858 339 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 ZNF37AP17032 561 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms