RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 RNF44Q7L0R7 432 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 OTOAQ7RTW8 1153 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 TMEM151BQ8IW70 566 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 SPC24Q8NBT2 197 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 OR2A1Q8NGT9 310 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 INPP5DQ92835 1189 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 C19orf60Q96EN9 201 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 HOMER3Q9NSC5 361 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 CDC23Q9UJX2 597 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 FBXL4Q9UKA2 621 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 TTC7AQ9ULT0 858 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-206ENST00000484733 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 PCDHGA10Q9Y5H3 936 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 HS3ST3B1Q9Y662 390 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 NFS1Q9Y697 457 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 NBASA2RRP1 2371 aa10.97□□□□□ -0.65
SCFD1-206ENST00000484733 MAST4O15021 2626 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 CTSVO60911 334 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 PHF2O75151 1096 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 OGNP20774 298 aaKnown RBP10.96□□□□□ -0.65
SCFD1-206ENST00000484733 MCM3P25205 808 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 MAGEA6P43360 314 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 BDKRB1P46663 353 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 EIF2S3LQ2VIR3 472 aaKnown RBP10.96□□□□□ -0.65
SCFD1-206ENST00000484733 WASHC2DQ5SRD0 308 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 PRMT9Q6P2P2 845 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 TAX1BP1Q86VP1 789 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 CISD2Q8N5K1 135 aaKnown RBP10.96□□□□□ -0.65
SCFD1-206ENST00000484733 OR2L3Q8NG85 312 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 PPP4R1Q8TF05 950 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 LPGAT1Q92604 370 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 WDR77Q9BQA1 342 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-206ENST00000484733 ILKAPQ9H0C8 392 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-206ENST00000484733 ASF1BQ9NVP2 202 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 CIDEBQ9UHD4 219 aa10.96□□□□□ -0.65
SCFD1-206ENST00000484733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.96□□□□□ -0.66
SCFD1-206ENST00000484733 OR2A25A4D2G3 310 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 ESR1P03372 595 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 MGAT1P26572 445 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 CARSP49589 748 aaKnown RBP10.96□□□□□ -0.66
SCFD1-206ENST00000484733 EIF3BP55884 814 aaKnown RBP10.96□□□□□ -0.66
SCFD1-206ENST00000484733 FOXL2P58012 376 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 CRADDP78560 199 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 BASP1P80723 227 aaKnown RBP10.96□□□□□ -0.66
SCFD1-206ENST00000484733 NR6A1Q15406 480 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 TUBB8Q3ZCM7 444 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 CCSMST1Q4G0I0 132 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 KIAA0930Q6ICG6 404 aaPredicted RBP10.96□□□□□ -0.66
SCFD1-206ENST00000484733 KIRREL2Q6UWL6 708 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.96□□□□□ -0.66
SCFD1-206ENST00000484733 SYBUQ9NX95 663 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 KLHL42Q9P2K6 505 aa10.96□□□□□ -0.66
SCFD1-206ENST00000484733 COPG1Q9Y678 874 aaKnown RBP10.96□□□□□ -0.66
SCFD1-206ENST00000484733 IGLV3-12A0A075B6K2 115 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 HYKKA2RU49 373 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 MASP2O00187 686 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 VAPBO95292 243 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 ITGA3P26006 1051 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 CMPK1P30085 196 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 VSX2P58304 361 aaPredicted RBP10.95□□□□□ -0.66
SCFD1-206ENST00000484733 RELAQ04206 551 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 ARHGAP19Q14CB8 494 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 PRTGQ2VWP7 1150 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 ANKRD20A4Q4UJ75 823 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 GSTA5Q7RTV2 222 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 CUZD1Q86UP6 607 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 OR9A1PQ8NGU1 263 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 MFSD3Q96ES6 412 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 MIPEPQ99797 713 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 LHPPQ9H008 270 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 ZBTB20Q9HC78 741 aaPredicted RBP10.95□□□□□ -0.66
SCFD1-206ENST00000484733 ZNF304Q9HCX3 659 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 MAP10Q9P2G4 905 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 ESPL1Q14674 2120 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 MYO1CO00159 1063 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 PSIP1O75475 530 aaKnown RBP10.95□□□□□ -0.66
SCFD1-206ENST00000484733 PSMB5P28074 263 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 FMO4P31512 558 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 HSD17B2P37059 387 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 TSFMP43897 325 aaKnown RBP10.95□□□□□ -0.66
SCFD1-206ENST00000484733 SARNPP82979 210 aaKnown RBP10.95□□□□□ -0.66
SCFD1-206ENST00000484733 RBBP7Q16576 425 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 AGAP7PQ5VUJ5 663 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 FRMPD2BQ6IN97 320 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 FBXO42Q6P3S6 717 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 NEK10Q6ZWH5 1172 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 FBXO15Q8NCQ5 510 aaPredicted RBP10.95□□□□□ -0.66
SCFD1-206ENST00000484733 PRR7Q8TB68 274 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 SMPDL3AQ92484 453 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 AGAP4Q96P64 663 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 LMF1Q96S06 567 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 ZFYVE21Q9BQ24 234 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 INTS10Q9NVR2 710 aaKnown RBP10.95□□□□□ -0.66
SCFD1-206ENST00000484733 VPS9D1Q9Y2B5 631 aa10.95□□□□□ -0.66
SCFD1-206ENST00000484733 A0A1W2PQ72 361 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 MED26O95402 600 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 HPP00738 406 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 FGGP02679 453 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 RNF224P0DH78 156 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 OR1D4P47884 311 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms