RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RUSC1-AS1Q66K80 236 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 ABRAXAS1Q6UWZ7 409 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 TOM1L2Q6ZVM7 507 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 ADCK1Q86TW2 530 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 MEX3DQ86XN8 651 aaKnown RBP4.25□□□□□ -1.73
VPS13A-211ENST00000484581 PTOV1Q86YD1 416 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 NPEPL1Q8NDH3 523 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 RNASE8Q8TDE3 154 aaKnown RBP4.25□□□□□ -1.73
VPS13A-211ENST00000484581 PRCCQ92733 491 aaPredicted RBP4.25□□□□□ -1.73
VPS13A-211ENST00000484581 ABTB1Q969K4 478 aaPredicted RBP4.25□□□□□ -1.73
VPS13A-211ENST00000484581 CDKN2AIPNLQ96HQ2 116 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 C3orf30Q96M34 536 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 FAM111AQ96PZ2 611 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 NEURL2Q9BR09 285 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 PRRG4Q9BZD6 226 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 RBM38Q9H0Z9 239 aaKnown RBP4.25□□□□□ -1.73
VPS13A-211ENST00000484581 S1PR5Q9H228 398 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 SYTL2Q9HCH5 934 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 GSN-AS1Q9NRJ2 163 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 TMEM30AQ9NV96 361 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 TAS2R3Q9NYW6 316 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 SIX4Q9UIU6 781 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 WDR83OSQ9Y284 106 aa4.25□□□□□ -1.73
VPS13A-211ENST00000484581 HBS1LQ9Y450 684 aaKnown RBP4.25□□□□□ -1.73
VPS13A-211ENST00000484581 NPHP3Q7Z494 1330 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 A0A0B4J203 849 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 TEX13DA0A0J9YY54 714 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 CASTOR2A6NHX0 329 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 F8VVB4 439 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 F8VWA3 439 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 GAPDHSO14556 408 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 NDC80O14777 642 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 ZNHIT1O43257 154 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 SOCS5O75159 536 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 REC8O95072 547 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 GUCA1CO95843 209 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 MOCS2O96007 188 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 LINC00271P0C7V0 271 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 FAM200BP0CF97 657 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 ZNF23P17027 643 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 HOXA11P31270 313 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 USP8P40818 1118 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 IL15P40933 162 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 RABIFP47224 123 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 HSD17B7P56937 341 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 POLR2FP61218 127 aaKnown RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 CX3CL1P78423 397 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 AKAP17AQ02040 695 aaKnown RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 DSC1Q08554 894 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 Q0VFX4 171 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 PTPN14Q15678 1187 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 MAPK11Q15759 364 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 C12orf60Q5U649 245 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 KCTD11Q693B1 232 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 PLXDC2Q6UX71 529 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 MRPL10Q7Z7H8 261 aaKnown RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 GPALPP1Q8IXQ4 340 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 SAMD14Q8IZD0 417 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 APCDD1Q8J025 514 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 RBMXL3Q8N7X1 1067 aaKnown RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 RDM1Q8NG50 284 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 KIAA1524Q8TCG1 905 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 SLC26A7Q8TE54 656 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 FAM216AQ8WUB2 273 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 TANKQ92844 425 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 OXNAD1Q96HP4 312 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 EPSTI1Q96J88 318 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 SGK494Q96LW2 274 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 C16orf45Q96MC5 204 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 NAP1L3Q99457 506 aaPredicted RBP4.24□□□□□ -1.73
VPS13A-211ENST00000484581 PKP2Q99959 881 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 TM6SF1Q9BZW5 370 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 SMARCAL1Q9NZC9 954 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 ZNF224Q9NZL3 707 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 OR2W1Q9Y3N9 320 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 INSL5Q9Y5Q6 135 aa4.24□□□□□ -1.73
VPS13A-211ENST00000484581 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
VPS13A-211ENST00000484581 PDS5AQ29RF7 1337 aaKnown RBP4.23□□□□□ -1.73
VPS13A-211ENST00000484581 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 LY6G6EA0A0G2JKS1 128 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 LINC01553A4QN01 128 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 PLOD2O00469 737 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 SOCS2O14508 198 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 SNX3O60493 162 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 KCNJ13O60928 360 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 WDR1O75083 606 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 PRDM1O75626 825 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 PDE9AO76083 593 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 TRIM16O95361 564 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 CLDN14O95500 239 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 CCDC192P0DO97 292 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 ACP2P11117 423 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 HSPA8P11142 646 aaKnown RBP4.23□□□□□ -1.73
VPS13A-211ENST00000484581 CYP2A7P20853 494 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 CBLP22681 906 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 MAGEB1P43366 347 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 CAMLGP49069 296 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 PDX1P52945 283 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 MLLT10P55197 1068 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 BRWD1-AS2P59051 145 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms