RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PRKCDQ05655 676 aa19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 MAD2L1Q13257 205 aaPredicted RBP19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 CAMK2BQ13554 666 aa19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 TIGD6Q17RP2 521 aa19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 SLX4IPQ5VYV7 408 aa19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 PITX2Q99697 317 aa19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 VPS9D1Q9Y2B5 631 aa19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 PCDHGB6Q9Y5F9 930 aa19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 PCDHGA6Q9Y5G7 932 aa19.24■□□□□ 0.67
RPUSD3-216ENST00000484134 GREB1Q4ZG55 1949 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 SLC28A1O00337 649 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 HOXC11O43248 304 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 CCNDBP1O95273 360 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 SEMG1P04279 462 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 CXCR2P25025 360 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 ABHD18Q0P651 414 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 AGAP6Q5VW22 663 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 SLC46A3Q7Z3Q1 461 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 ELMOD1Q8N336 334 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 OR6F1Q8NGZ6 308 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 AGAP4Q96P64 663 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 SDHCQ99643 169 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 P2RY12Q9H244 342 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 PPT2Q9UMR5 302 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 SAMD4AQ9UPU9 718 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 MAN2B2Q9Y2E5 1009 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 LOC730098B7Z3J9 87 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 MANBAO00462 879 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 DDNO94850 711 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 TACR1P25103 407 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 GRB14Q14449 540 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 ADAMTSL2Q86TH1 951 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 AMER2Q8N7J2 671 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 Q96MT0 163 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 CENPOQ9BU64 300 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 REXO4Q9GZR2 422 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 AASDHPPTQ9NRN7 309 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 KIF17Q9P2E2 1029 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 SNX6Q9UNH7 406 aa19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 ARIH1Q9Y4X5 557 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-216ENST00000484134 MN1Q10571 1320 aaPredicted RBP19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 AP3D1O14617 1153 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 ESR1P03372 595 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 S100A3P33764 101 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 NXNL2Q5VZ03 156 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 ZCCHC8Q6NZY4 707 aaKnown RBP19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 FAHD1Q6P587 224 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 TMEM132CQ8N3T6 1108 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 A3GALT2U3KPV4 340 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 PDHXO00330 501 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 INSIG1O15503 277 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 IDH3BO43837 385 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 FABP3P05413 133 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 CA5AP35218 305 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 MRPS6P82932 125 aaKnown RBP19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 GPR153Q6NV75 609 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 HORMAD1Q86X24 394 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 SLC16A10Q8TF71 515 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 PSKH2Q96QS6 385 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 ASIC5Q9NY37 505 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 PSORS1C1Q9UIG5 152 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 VPS4AQ9UN37 437 aa19.22■□□□□ 0.67
RPUSD3-216ENST00000484134 SLC12A8A0AV02 714 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 TLL1O43897 1013 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 GLUD1P00367 558 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 PTGER3P43115 390 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 LIMK1P53667 647 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 RACK1P63244 317 aaKnown RBP19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 CAMK2GQ13555 558 aaPredicted RBP19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 SMU1Q2TAY7 513 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 ATAD3CQ5T2N8 411 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 CARNMT1Q8N4J0 409 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 TTC9BQ8N6N2 239 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 LKAAEAR1Q8TD35 194 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 TSSK3Q96PN8 268 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 SPON2Q9BUD6 331 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 APOL5Q9BWW9 433 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 ACPTQ9BZG2 426 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 C14orf119Q9NWQ9 140 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 THUMPD1Q9NXG2 353 aaKnown RBP19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 EHD3Q9NZN3 535 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 MARCH2Q9P0N8 246 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 ANGPTL3Q9Y5C1 460 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 PLXNA4Q9HCM2 1894 aa19.21■□□□□ 0.67
RPUSD3-216ENST00000484134 STX7O15400 261 aaKnown RBP19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 LRATO95237 230 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 CR2P20023 1033 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 S100A5P33763 92 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 RPS14P62263 151 aaKnown RBP19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 GGHQ92820 318 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 KCNC2Q96PR1 638 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 CDK5RAP1Q96SZ6 601 aaKnown RBP19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 CD244Q9BZW8 370 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 ABCG8Q9H221 673 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 PARVBQ9HBI1 364 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 PCDHGA3Q9Y5H0 932 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 CHD5Q8TDI0 1954 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 KRT8P05787 483 aa19.2■□□□□ 0.66
RPUSD3-216ENST00000484134 HOXB6P17509 224 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms