RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ZCCHC2Q9C0B9 1178 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR52A5Q9H2C5 316 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 ELOVL6Q9H5J4 265 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 LRTM1Q9HBL6 345 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 FZD3Q9NPG1 666 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 ABCD2Q9UBJ2 740 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 PSMD13Q9UNM6 376 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 NEUROG3Q9Y4Z2 214 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 PIAS3Q9Y6X2 628 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 C17orf113A0A1B0GUU1 675 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 FAM234BA2RU67 622 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 PABPN1LA6NDY0 278 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 FAM86C2PA6NEL3 165 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC28A1O00337 649 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 VEGFDO43915 354 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 B3GALT4O96024 378 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 KRT6AP02538 564 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 KRT6BP04259 564 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 BCKDHAP12694 445 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 JUPP14923 745 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 VARSP26640 1264 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 SOX11P35716 441 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TRIM23P36406 574 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 KRT6CP48668 564 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 PHC1P78364 1004 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 IRF8Q02556 426 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 IMPG1Q17R60 797 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 USP39Q53GS9 565 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 XKR6Q5GH73 641 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TMEM31Q5JXX7 168 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 LPCAT4Q643R3 524 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 FRG2Q64ET8 278 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZNF776Q68DI1 518 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 DLEU7Q6UYE1 221 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 CYP2R1Q6VVX0 501 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 DHDDSQ86SQ9 333 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 LRRC56Q8IYG6 542 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 LILRA2Q8N149 483 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 CHCHD4Q8N4Q1 142 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 MINDY1Q8N5J2 469 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 C2orf73Q8N5S3 287 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TP53I13Q8NBR0 393 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR5AR1Q8NGP9 310 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 WDR20Q8TBZ3 569 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 FAM110BQ8TC76 370 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 GANCQ8TET4 914 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TSPEARQ8WU66 669 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 JADE3Q92613 823 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 IL17FQ96PD4 163 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 FRG2BQ96QU4 278 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TEX101Q9BY14 249 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 KCNK12Q9HB15 430 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 C1orf109Q9NX04 203 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 PLAGL1Q9UM63 463 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 USP22Q9UPT9 525 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 PCDHA9Q9Y5H5 950 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 KNL1Q8NG31 2342 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 A0A1W2PQU0 124 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SCAMP1O15126 338 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SH3BGRLO75368 114 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 ETHE1O95571 254 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 KLF8O95600 359 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 ASGR2P07307 311 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 HOXB2P14652 356 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 NPPBP16860 134 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 JAK1P23458 1154 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 VHLP40337 213 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 ADPRHP54922 357 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBPL1P62380 186 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 TAP2Q03519 686 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 GTF2H3Q13889 308 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 NFYCQ13952 458 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 FAM174BQ3ZCQ3 159 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 TMEM259Q4ZIN3 620 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 COQ5Q5HYK3 327 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SPANXN4Q5MJ08 99 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 CATSPEREQ5SY80 951 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 AMZ2Q86W34 360 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SYTL1Q8IYJ3 562 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC44A3Q8N4M1 653 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 FAM131CQ96AQ9 280 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZNF514Q96K75 400 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 FOPNLQ96NB1 174 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 MYOCQ99972 504 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 ARPC5LQ9BPX5 153 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 HOPXQ9BPY8 73 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SPOCK3Q9BQ16 436 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 C1QTNF2Q9BXJ5 285 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 DPEP2Q9H4A9 486 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SUCOQ9UBS9 1254 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 EGFL7Q9UHF1 273 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SNX6Q9UNH7 406 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZNF232Q9UNY5 417 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 WDR37Q9Y2I8 494 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 NVLO15381 856 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 PLRG1O43660 514 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 NARSO43776 548 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 PEX2P28328 305 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 PPP2CBP62714 309 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 PPP2CAP67775 309 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms