RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 RGMBQ6NW40 437 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 FAM180BQ6P0A1 224 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.39□□□□□ -0.43
VPS52-218ENST00000482399 CACTIN-AS1Q8N1I8 211 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 TTPALQ9BTX7 342 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 PMF1-BGLAPU3KQ54 211 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 DYTNA2CJ06 578 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 EFCAB10A6NFE3 127 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 SOBPA7XYQ1 873 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 TSC22D2O75157 780 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 JRKO75564 520 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 RFPL2O75678 378 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 GJB5O95377 273 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 CLDN7O95471 211 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 ITIH1P19827 911 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 MZF1P28698 734 aaPredicted RBP12.39□□□□□ -0.43
VPS52-218ENST00000482399 SOX6P35712 828 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 PTGER3P43115 390 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 COL9A2Q14055 689 aaPredicted RBP12.39□□□□□ -0.43
VPS52-218ENST00000482399 XKR7Q5GH72 579 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 XKR4Q5GH76 650 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 STEAP3Q658P3 488 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 TPGS1Q6ZTW0 290 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 ADGRG2Q8IZP9 1017 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 DPF3Q92784 378 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 CITED4Q96RK1 184 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 NEK6Q9HC98 313 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 DCAF13Q9NV06 445 aaKnown RBP12.39□□□□□ -0.43
VPS52-218ENST00000482399 MED16Q9Y2X0 877 aa12.39□□□□□ -0.43
VPS52-218ENST00000482399 SYNDIG1LA6NDD5 238 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 MGAT4DA6NG13 374 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 CLDN9O95484 217 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 CCDC159P0C7I6 412 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 CORO1AP31146 461 aaKnown RBP12.38□□□□□ -0.43
VPS52-218ENST00000482399 DAPP51397 102 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 VLDLRP98155 873 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 ACSM2AQ08AH3 577 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 TTLL9Q3SXZ7 439 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 ACSM2BQ68CK6 577 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 THOC7Q6I9Y2 204 aaKnown RBP12.38□□□□□ -0.43
VPS52-218ENST00000482399 CELF2-AS1Q8N7Q2 184 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 KCNJ9Q92806 393 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 CNPPD1Q9BV87 410 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 RNF38Q9H0F5 515 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 ABCB9Q9NP78 766 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 SNX6Q9UNH7 406 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 SLC22A14Q9Y267 594 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 H3BN98 237 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 MANBAO00462 879 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 PDYNP01213 254 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 CSF2P04141 144 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 JUNBP17275 347 aaPredicted RBP12.38□□□□□ -0.43
VPS52-218ENST00000482399 S100A1P23297 94 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 PPP5CP53041 499 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 RUNX1T1Q06455 604 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 CAMK2GQ13555 558 aaPredicted RBP12.38□□□□□ -0.43
VPS52-218ENST00000482399 ARMCX4Q5H9R4 360 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 ANKS3Q6ZW76 656 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 NEK10Q6ZWH5 1172 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 UBE2R2Q712K3 238 aaPredicted RBP12.38□□□□□ -0.43
VPS52-218ENST00000482399 TCAIMQ8N3R3 496 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 LKAAEAR1Q8TD35 194 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 COPS8Q99627 209 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 KATNBL1Q9H079 304 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 ZFYVE1Q9HBF4 777 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 ACOT13Q9NPJ3 140 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 RAD18Q9NS91 495 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
VPS52-218ENST00000482399 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 TRIM64CA6NLI5 447 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SAP18O00422 153 aaKnown RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 SUV39H1O43463 412 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 NUDT7P0C024 238 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 HTR7P34969 479 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 LIPAP38571 399 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ZNF140P52738 457 aaPredicted RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 PHC1P78364 1004 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SELENBP1Q13228 472 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ZNF362Q5T0B9 420 aaPredicted RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 KIAA1614Q5VZ46 1190 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 PAPD5Q8NDF8 572 aaKnown RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SH3KBP1Q96B97 665 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 OTULINQ96BN8 352 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 C1orf74Q96LT6 269 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 TTYH2Q9BSA4 534 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ITPAQ9BY32 194 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 TIGARQ9NQ88 270 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 TNFRSF11BO00300 401 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ACSL4O60488 711 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 TBL1XO60907 577 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 HPRP00739 348 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 ZNF24P17028 368 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 PURAQ00577 322 aaKnown RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 GRIK2Q13002 908 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 PLEKHG6Q3KR16 790 aa12.37□□□□□ -0.43
VPS52-218ENST00000482399 SETMARQ53H47 684 aaPredicted RBP12.37□□□□□ -0.43
VPS52-218ENST00000482399 CPZQ66K79 652 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms