RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PTPN9P43378 593 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 TUFMP49411 452 aaKnown RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 CACNA2D1P54289 1103 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 GPX6P59796 221 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 TXNL4AP83876 142 aaKnown RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 SHC2P98077 582 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 B4GALNT1Q00973 533 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 RBPJQ06330 500 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 BST1Q10588 318 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 SEMA3BQ13214 749 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 SLAQ13239 276 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 DNASE1L3Q13609 305 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 PON2Q15165 354 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 SMN1Q16637 294 aaKnown RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 PDK4Q16654 411 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 KYAT1Q16773 422 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 KLHL40Q2TBA0 621 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ZNF829Q3KNS6 432 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 CCDC14Q49A88 953 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 PCID2Q5JVF3 399 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 C9orf50Q5SZB4 431 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ARHGEF16Q5VV41 709 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ZDHHC20Q5W0Z9 365 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 NCR3LG1Q68D85 454 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 TMEM211Q6ICI0 200 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 TRIM65Q6PJ69 517 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 TSSK4Q6SA08 328 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 PCSK4Q6UW60 755 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 NCCRP1Q6ZVX7 275 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 ADIPOR2Q86V24 386 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 SERINC5Q86VE9 423 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 LRRC6Q86X45 466 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 KATNAL2Q8IYT4 538 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ZBTB2Q8N680 514 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 TRPV1Q8NER1 839 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 OR56B1Q8NGI3 324 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 OR10T2Q8NGX3 314 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 BBS10Q8TAM1 723 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ATP8B4Q8TF62 1192 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 CLEC4CQ8WTT0 213 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 HEXDCQ8WVB3 486 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 FIG4Q92562 907 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 LPGAT1Q92604 370 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 GTF3C6Q969F1 213 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 BSCL2Q96G97 398 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 OXNAD1Q96HP4 312 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 MAGED4Q96JG8 741 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 PANX3Q96QZ0 392 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 CYTH2Q99418 400 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 TIMP4Q99727 224 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 INPP5KQ9BT40 448 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 C9orf16Q9BUW7 83 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 CINPQ9BW66 212 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 SPZ1Q9BXG8 430 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 IFIH1Q9BYX4 1025 aaKnown RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 MAGT1Q9H0U3 335 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 EPHX3Q9H6B9 360 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 LRRC19Q9H756 370 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 SYNPO2LQ9H987 977 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 MRM3Q9HC36 420 aaKnown RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 KCNMB3Q9NPA1 279 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ZFP57Q9NU63 452 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 C20orf141Q9NUB4 165 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 TRNAU1APQ9NX07 287 aaKnown RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 OR6C3Q9NZP0 311 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 PDP1Q9P0J1 537 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 SENP1Q9P0U3 644 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ABI3Q9P2A4 366 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 WNT16Q9UBV4 365 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 CTSFQ9UBX1 484 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 PACSIN2Q9UNF0 486 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 OSGIN2Q9Y236 505 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 UBE2J1Q9Y385 318 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 NPC1L1Q9UHC9 1359 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 LOC100509620A0A075B734 347 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ARHGEF35A5YM69 484 aa4□□□□□ -1.77
VPS41-212ENST00000482217 TMEM221A6NGB7 291 aa4□□□□□ -1.77
VPS41-212ENST00000482217 C4orf47A7E2U8 309 aa4□□□□□ -1.77
VPS41-212ENST00000482217 PSMD11O00231 422 aa4□□□□□ -1.77
VPS41-212ENST00000482217 TULP2O00295 520 aa4□□□□□ -1.77
VPS41-212ENST00000482217 NDUFAB1O14561 156 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ZNF264O43296 627 aa4□□□□□ -1.77
VPS41-212ENST00000482217 CCNT1O60563 726 aaKnown RBP4□□□□□ -1.77
VPS41-212ENST00000482217 ATP5HO75947 161 aa4□□□□□ -1.77
VPS41-212ENST00000482217 BAG4O95429 457 aaKnown RBP4□□□□□ -1.77
VPS41-212ENST00000482217 AGTP01019 485 aa4□□□□□ -1.77
VPS41-212ENST00000482217 UGT2B4P06133 528 aa4□□□□□ -1.77
VPS41-212ENST00000482217 RETP07949 1114 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ZNF8P17098 575 aaPredicted RBP4□□□□□ -1.77
VPS41-212ENST00000482217 WT1P19544 449 aaPredicted RBP4□□□□□ -1.77
VPS41-212ENST00000482217 SRMP19623 302 aa4□□□□□ -1.77
VPS41-212ENST00000482217 TCN1P20061 433 aaPredicted RBP4□□□□□ -1.77
VPS41-212ENST00000482217 EDN2P20800 178 aa4□□□□□ -1.77
VPS41-212ENST00000482217 UCP1P25874 307 aa4□□□□□ -1.77
VPS41-212ENST00000482217 POU1F1P28069 291 aa4□□□□□ -1.77
VPS41-212ENST00000482217 CCND3P30281 292 aaPredicted RBP4□□□□□ -1.77
VPS41-212ENST00000482217 TIA1P31483 386 aaKnown RBP eCLIP4□□□□□ -1.77
VPS41-212ENST00000482217 ARL1P40616 181 aaPredicted RBP4□□□□□ -1.77
VPS41-212ENST00000482217 ETV5P41161 510 aa4□□□□□ -1.77
VPS41-212ENST00000482217 SYKP43405 635 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms