RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 H2AFJQ9BTM1 129 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 HGH1Q9BTY7 390 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 PARVBQ9HBI1 364 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 TMEM216Q9P0N5 145 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 GRID1Q9ULK0 1009 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 PADI4Q9UM07 663 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 PDE10AQ9Y233 779 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 ARHGEF33A8MVX0 844 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 PPM1DO15297 605 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 GLRA3O75311 464 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 RBP1P09455 135 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 MYF5P13349 255 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 CRHR1P34998 444 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 FASLGP48023 281 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 KPNA2P52292 529 aaKnown RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 MAGOHP61326 146 aaKnown RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 UBE2IP63279 158 aaKnown RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 OR4D1Q15615 310 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 PHKG1Q16816 387 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 AGBL2Q5U5Z8 902 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 CDHR3Q6ZTQ4 885 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 FRA10AC1Q70Z53 315 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 DCUN1D3Q8IWE4 304 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 FAM181AQ8N9Y4 354 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 RHEBL1Q8TAI7 183 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 RAD51AP1Q96B01 352 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 APOPT1Q96IL0 206 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 ATP6V1G3Q96LB4 118 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 CAMK1GQ96NX5 476 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 KIR3DX1Q9H7L2 352 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 NCKIPSDQ9NZQ3 722 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 LRIT1Q9P2V4 623 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 RNF112Q9ULX5 631 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 ACTL7BQ9Y614 415 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 RIF1Q5UIP0 2472 aaKnown RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 ZFHX2Q9C0A1 2572 aaPredicted RBP11.24□□□□□ -0.61
HPS4-212ENST00000481910 DMDP11532 3685 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 LAMA1P25391 3075 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 RHPN2P1A8MT19 583 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 GFRA3O60609 400 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 GUCA1CO95843 209 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 ENO2P09104 434 aaPredicted RBP11.24□□□□□ -0.61
HPS4-212ENST00000481910 KCNC1P48547 511 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 GPR18Q14330 331 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 NR0B2Q15466 257 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 CCSMST1Q4G0I0 132 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 TTMPQ5BVD1 217 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.24□□□□□ -0.61
HPS4-212ENST00000481910 N4BP2L1Q5TBK1 243 aaPredicted RBP11.24□□□□□ -0.61
HPS4-212ENST00000481910 STPG1Q5TH74 334 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 TMEM164Q5U3C3 297 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 ALKBH2Q6NS38 261 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 TMEM53Q6P2H8 277 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 C16orf46Q6P387 395 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 ZNF761Q86XN6 746 aaPredicted RBP11.24□□□□□ -0.61
HPS4-212ENST00000481910 GPSM1Q86YR5 675 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 RASGRP3Q8IV61 690 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 TRIML2Q8N7C3 387 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 GALNT6Q8NCL4 622 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 SH3KBP1Q96B97 665 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 TLCD1Q96CP7 247 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 ARL15Q9NXU5 204 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 DNAH14Q0VDD8 3507 aa11.24□□□□□ -0.61
HPS4-212ENST00000481910 CPED1A4D0V7 1026 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 KRT87PA6NCN2 255 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 NCF1BA6NI72 391 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 NCF1CA8MVU1 366 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 NUDT21O43809 227 aaKnown RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 SHOX2O60902 331 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 LDOC1O95751 146 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 NCF1P14598 390 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 GLB1P16278 677 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 CD97P48960 835 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 DAB2P98082 770 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 PLCL1Q15111 1095 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 TGFBIQ15582 683 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 PPP1R3AQ16821 1122 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 TECRLQ5HYJ1 363 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 TMEM26Q6ZUK4 368 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 NAXDQ8IW45 347 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 KIAA2013Q8IYS2 634 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 FBXO15Q8NCQ5 510 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 OR52E1Q8NGJ3 308 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 OR9A1PQ8NGU1 263 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 LCN9Q8WX39 176 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 EXT2Q93063 718 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 SLC38A3Q99624 504 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 MRPL57Q9BQC6 102 aaKnown RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 ACTR5Q9H9F9 607 aaPredicted RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 RDH14Q9HBH5 336 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 SSU72Q9NP77 194 aaKnown RBP11.23□□□□□ -0.61
HPS4-212ENST00000481910 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 XPR1Q9UBH6 696 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 ATPIF1Q9UII2 106 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 PLAGL1Q9UM63 463 aa11.23□□□□□ -0.61
HPS4-212ENST00000481910 OARD1Q9Y530 152 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms