RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 LRRC4CQ9HCJ2 640 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 DHCR7Q9UBM7 475 aaKnown RBP8.68□□□□□ -1.02
HLA-B-253ENST00000481849 KLHL20Q9Y2M5 609 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 ZNF451Q9Y4E5 1061 aa8.68□□□□□ -1.02
HLA-B-253ENST00000481849 PCDHGA9Q9Y5G4 932 aaKnown RBP8.68□□□□□ -1.02
HLA-B-253ENST00000481849 BTNL10A8MVZ5 291 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 H7C0S8 307 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 LIN7AO14910 233 aaPredicted RBP8.67□□□□□ -1.02
HLA-B-253ENST00000481849 GSC2O15499 205 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 OR1I1O60431 355 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 DPM1O60762 260 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 AP2A2O94973 939 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 AP2A1O95782 977 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 IFNB1P01574 187 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 FTH1P02794 183 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 CHRM5P08912 532 aaPredicted RBP8.67□□□□□ -1.02
HLA-B-253ENST00000481849 TPBGLP0DKB5 382 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 SHMT2P34897 504 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 NSG1P42857 185 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 INPP5JQ15735 1006 aaPredicted RBP8.67□□□□□ -1.02
HLA-B-253ENST00000481849 FHL5Q5TD97 284 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 JMJD6Q6NYC1 403 aaPredicted RBP8.67□□□□□ -1.02
HLA-B-253ENST00000481849 PPP1R21Q6ZMI0 780 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 Q6ZS46 218 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 ACAD11Q709F0 780 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 PRUNE1Q86TP1 453 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 TAX1BP1Q86VP1 789 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 RAB43Q86YS6 212 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 TICAM1Q8IUC6 712 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 TMEM151BQ8IW70 566 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 KLHDC8BQ8IXV7 354 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 ZNF655Q8N720 491 aaPredicted RBP8.67□□□□□ -1.02
HLA-B-253ENST00000481849 CFAP61Q8NHU2 1237 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 HDAC10Q969S8 669 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 SGSM3Q96HU1 749 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 SYTL2Q9HCH5 934 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 MLXIPLQ9NP71 852 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 SLAMF7Q9NQ25 335 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 GPR83Q9NYM4 423 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 SLC2A6Q9UGQ3 507 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 GPN3Q9UHW5 284 aaPredicted RBP8.67□□□□□ -1.02
HLA-B-253ENST00000481849 G3BP2Q9UN86 482 aaKnown RBP8.67□□□□□ -1.02
HLA-B-253ENST00000481849 CDYLQ9Y232 598 aa8.67□□□□□ -1.02
HLA-B-253ENST00000481849 PTRH2Q9Y3E5 179 aaKnown RBP8.67□□□□□ -1.02
HLA-B-253ENST00000481849 A0A0J9YY10 115 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 MROH6A6NGR9 719 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 IQCF5A8MTL0 148 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 E7EVH7 732 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 PSMD3O43242 534 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 KRT86O43790 486 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 CEACAM4O75871 244 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 SORBS2O94875 1100 aaKnown RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 GAS8O95995 478 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 GOT2P00505 430 aaKnown RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 HBQ1P09105 142 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 OR56A5P0C7T3 313 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 ETS1P14921 441 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 ACADLP28330 430 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 PEBP1P30086 187 aaKnown RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 FOXN2P32314 431 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 FOLR3P41439 243 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 GRIA1P42261 906 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 RRADP55042 308 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 HSPA14Q0VDF9 509 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 KIF5AQ12840 1032 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 KLF1Q13351 362 aaPredicted RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 MRPL49Q13405 166 aaKnown RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 ITIH4Q14624 930 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 EIF2S3LQ2VIR3 472 aaKnown RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 PAPD7Q5XG87 772 aaKnown RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 SLC6A19Q695T7 634 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 PACS1Q6VY07 963 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 MED25Q71SY5 747 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 MRGPREQ86SM8 312 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 LDB1Q86U70 411 aaPredicted RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 TBC1D21Q8IYX1 336 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 SYCE1Q8N0S2 351 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 RBMXL3Q8N7X1 1067 aaKnown RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 Q8NA96 180 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 OR6P1Q8NGX9 317 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 SLC35B2Q8TB61 432 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 C19orf60Q96EN9 201 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 TCTN2Q96GX1 697 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 MRFAP1L1Q96HT8 127 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 BAG1Q99933 345 aaPredicted RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 C19orf43Q9BQ61 176 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 DPH2Q9BQC3 489 aaPredicted RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 CASS4Q9NQ75 786 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 TXLNGQ9NUQ3 528 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 IFT80Q9P2H3 777 aaPredicted RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 NDOR1Q9UHB4 597 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 POLG2Q9UHN1 485 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 PADI2Q9Y2J8 665 aa8.66□□□□□ -1.02
HLA-B-253ENST00000481849 ZNF106Q9H2Y7 1883 aaKnown RBP8.66□□□□□ -1.02
HLA-B-253ENST00000481849 RP1L1Q8IWN7 2480 aaPredicted RBP8.65□□□□□ -1.02
HLA-B-253ENST00000481849 APCP25054 2843 aa8.65□□□□□ -1.02
HLA-B-253ENST00000481849 SLC5A10A0PJK1 596 aa8.65□□□□□ -1.02
HLA-B-253ENST00000481849 A1L4Q6 167 aa8.65□□□□□ -1.02
HLA-B-253ENST00000481849 MIF4GDA9UHW6 222 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms