RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 MAP10Q9P2G4 905 aa17.78■□□□□ 0.44
CLK1-211ENST00000481641 ESPL1Q14674 2120 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.77■□□□□ 0.44
CLK1-211ENST00000481641 LOC105369274A0A096LPK9 316 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 LOC102723532A0A0G2JNH3 316 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 A0A0J9YVX5 310 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 GOLGA8MH3BSY2 632 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 DSCR3O14972 297 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 CD63P08962 238 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 PLEKHN1Q494U1 663 aaPredicted RBP17.77■□□□□ 0.44
CLK1-211ENST00000481641 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.77■□□□□ 0.44
CLK1-211ENST00000481641 WASHC2DQ5SRD0 308 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 VWA5B1Q5TIE3 1220 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 OVCH1Q7RTY7 1134 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 OR4N4Q8N0Y3 316 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 CLEC1AQ8NC01 280 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 OR2L3Q8NG85 312 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 OR2A1Q8NGT9 310 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 MAGOHBQ96A72 148 aaKnown RBP17.77■□□□□ 0.44
CLK1-211ENST00000481641 PNPLA2Q96AD5 504 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 ZUFSPQ96AP4 578 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 C19orf60Q96EN9 201 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 SLC30A3Q99726 388 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 ACAT2Q9BWD1 397 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 SOX17Q9H6I2 414 aaPredicted RBP17.77■□□□□ 0.44
CLK1-211ENST00000481641 ZNF552Q9H707 407 aaPredicted RBP17.77■□□□□ 0.44
CLK1-211ENST00000481641 ZBTB20Q9HC78 741 aaPredicted RBP17.77■□□□□ 0.44
CLK1-211ENST00000481641 MAU2Q9Y6X3 613 aa17.77■□□□□ 0.44
CLK1-211ENST00000481641 PCM1Q15154 2024 aa17.77■□□□□ 0.43
CLK1-211ENST00000481641 BLACEA4D250 179 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 ARHGEF33A8MVX0 844 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 TARM1B6A8C7 271 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 MATN4O95460 622 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 ESR1P03372 595 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 OGNP20774 298 aaKnown RBP17.76■□□□□ 0.43
CLK1-211ENST00000481641 CCNFP41002 786 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 MAGEA6P43360 314 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 GRM7Q14831 915 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 MYBPC3Q14896 1274 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 NKG7Q16617 165 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 CYP2A13Q16696 494 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 KLHL38Q2WGJ6 581 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 TCTE1Q5JU00 501 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 RNF187Q5TA31 235 aaPredicted RBP17.76■□□□□ 0.43
CLK1-211ENST00000481641 NEPROQ6NW34 567 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 SUSD1Q6UWL2 747 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 CILP2Q8IUL8 1156 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 RAB42Q8N4Z0 105 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 TTC29Q8NA56 475 aaPredicted RBP17.76■□□□□ 0.43
CLK1-211ENST00000481641 HMGCLL1Q8TB92 370 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 ZNF669Q96BR6 464 aaPredicted RBP17.76■□□□□ 0.43
CLK1-211ENST00000481641 TCF12Q99081 682 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 SPSB2Q99619 263 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 CTSFQ9UBX1 484 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 ZC3H7BQ9UGR2 993 aaKnown RBP17.76■□□□□ 0.43
CLK1-211ENST00000481641 CDC23Q9UJX2 597 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 FBXL4Q9UKA2 621 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 DOCK10Q96BY6 2186 aa17.76■□□□□ 0.43
CLK1-211ENST00000481641 FITM1A5D6W6 292 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 H3BMM5 538 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 AGPSO00116 658 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 ONECUT2O95948 504 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 EIF2S1P05198 315 aaKnown RBP17.75■□□□□ 0.43
CLK1-211ENST00000481641 PKMP14618 531 aaKnown RBP17.75■□□□□ 0.43
CLK1-211ENST00000481641 SARNPP82979 210 aaKnown RBP17.75■□□□□ 0.43
CLK1-211ENST00000481641 TSTA3Q13630 321 aaPredicted RBP17.75■□□□□ 0.43
CLK1-211ENST00000481641 DHX34Q14147 1143 aaKnown RBP17.75■□□□□ 0.43
CLK1-211ENST00000481641 ANKRD20A4Q4UJ75 823 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 HPS6Q86YV9 775 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 DENND6AQ8IWF6 608 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 AGGF1Q8N302 714 aaeCLIP17.75■□□□□ 0.43
CLK1-211ENST00000481641 RASGEF1CQ8N431 466 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 OR9A1PQ8NGU1 263 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 FKBP10Q96AY3 582 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 MESP1Q9BRJ9 268 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 SLC6A20Q9NP91 592 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 FBXO6Q9NRD1 293 aaPredicted RBP17.75■□□□□ 0.43
CLK1-211ENST00000481641 SPATA7Q9P0W8 599 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 SAMD15Q9P1V8 674 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 C5AR2Q9P296 337 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 MRFAP1Q9Y605 127 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 NUP210LQ5VU65 1888 aa17.75■□□□□ 0.43
CLK1-211ENST00000481641 SPTAN1Q13813 2472 aaKnown RBP17.75■□□□□ 0.43
CLK1-211ENST00000481641 MDC1Q14676 2089 aaKnown RBP17.75■□□□□ 0.43
CLK1-211ENST00000481641 HYKKA2RU49 373 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 TCP11X1B4DZS4 312 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 E5RI56 91 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 SOCS6O14544 535 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 PFDN6O15212 129 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 FKBP9O95302 570 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 PIM1P11309 404 aaPredicted RBP17.74■□□□□ 0.43
CLK1-211ENST00000481641 PAMP19021 973 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 MMP11P24347 488 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 ATP5DP30049 168 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 COILP38432 576 aaPredicted RBP17.74■□□□□ 0.43
CLK1-211ENST00000481641 ADARP55265 1226 aaKnown RBP17.74■□□□□ 0.43
CLK1-211ENST00000481641 CTBP1Q13363 440 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 MRPL49Q13405 166 aaKnown RBP17.74■□□□□ 0.43
CLK1-211ENST00000481641 CUL1Q13616 776 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms