RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 GPATCH11Q8N954 259 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 OR2L3Q8NG85 312 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 OR9A1PQ8NGU1 263 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 GSDMBQ8TAX9 411 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 ZNF480Q8WV37 535 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 ASB11Q8WXH4 323 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 RAD51AP1Q96B01 352 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 CLIP3Q96DZ5 547 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 TCTN2Q96GX1 697 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 RUNDC3BQ96NL0 473 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 ACTR5Q9H9F9 607 aaPredicted RBP10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 SAYSD1Q9NPB0 183 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 SLC22A11Q9NSA0 550 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 EURLQ9NYK6 297 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 RNF14Q9UBS8 474 aa10.96□□□□□ -0.65
RAPGEF1-207ENST00000481260 SPTA1P02549 2419 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 CDC14CA4D256 554 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 GFYI3L273 518 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 DNAJB5O75953 348 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 OR2B3O76000 313 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 TTC4O95801 387 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 SYF2O95926 243 aaKnown RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 RPN2P04844 631 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 NR1D1P20393 614 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 FDXRP22570 491 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 GCGRP47871 477 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 GPX6P59796 221 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 CHAF1BQ13112 559 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 CPZQ66K79 652 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 ZNF572Q7Z3I7 529 aaPredicted RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 PLD3Q8IV08 490 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 SYTL1Q8IYJ3 562 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 AMER2Q8N7J2 671 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 ENDOVQ8N8Q3 282 aaKnown RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 ZSCAN1Q8NBB4 408 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 NOA1Q8NC60 698 aaKnown RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 HMGCLL1Q8TB92 370 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 CALML6Q8TD86 181 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 KIAA1143Q96AT1 154 aaPredicted RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 LINGO1Q96FE5 620 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 MESP1Q9BRJ9 268 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 LRRC1Q9BTT6 524 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 UNKQ9C0B0 810 aaKnown RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 CCDC68Q9H2F9 335 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 CUEDC1Q9NWM3 386 aaPredicted RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 MOCS1Q9NZB8 636 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 TRMT6Q9UJA5 497 aaKnown RBP10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 PCDHB3Q9Y5E6 796 aa10.95□□□□□ -0.66
RAPGEF1-207ENST00000481260 A0A0J9YVX5 310 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 E7ENX8 843 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 E7EQ34 232 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 PFDN6O15212 129 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 VPS26AO75436 327 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 CREG1O75629 220 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 FAM155BO75949 473 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 URI1O94763 535 aaPredicted RBP10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 CCNYL3P0C7X3 344 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 MSL3P1P0C860 447 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 MPC1LP0DKB6 136 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 SAT1P21673 171 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 IMPA1P29218 277 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 CCNFP41002 786 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 PNLIPRP1P54315 467 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 PLTPP55058 493 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 POLE2P56282 527 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 TAP2Q03519 686 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 EFTUD2Q15029 972 aaKnown RBP eCLIP10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 FBXO42Q6P3S6 717 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 UBE2R2Q712K3 238 aaPredicted RBP10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 STRA8Q7Z7C7 330 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 BPHLQ86WA6 291 aaPredicted RBP10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 CEP97Q8IW35 865 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 KIF18AQ8NI77 898 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 FBXO25Q8TCJ0 367 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 ZNF592Q92610 1267 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 FOPNLQ96NB1 174 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 GBP5Q96PP8 586 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 MCMBPQ9BTE3 642 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 TRIM55Q9BYV6 548 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 CAB39LQ9H9S4 337 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 FANCEQ9HB96 536 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 SPATA7Q9P0W8 599 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 WHRNQ9P202 907 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 KLHL42Q9P2K6 505 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 TAC3Q9UHF0 121 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 SERTAD3Q9UJW9 196 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 CDC23Q9UJX2 597 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 PLCL2Q9UPR0 1127 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 PDE10AQ9Y233 779 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 VPS9D1Q9Y2B5 631 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 PCDHGA6Q9Y5G7 932 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 SEC16AO15027 2179 aa10.94□□□□□ -0.66
RAPGEF1-207ENST00000481260 FFAR3O14843 346 aa10.93□□□□□ -0.66
RAPGEF1-207ENST00000481260 GPR42O15529 346 aa10.93□□□□□ -0.66
RAPGEF1-207ENST00000481260 ZSCAN9O15535 394 aaPredicted RBP10.93□□□□□ -0.66
RAPGEF1-207ENST00000481260 CATP04040 527 aaKnown RBP10.93□□□□□ -0.66
RAPGEF1-207ENST00000481260 PDGFAP04085 211 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms