RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 AGAP4Q96P64 663 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 ENKD1Q9H0I2 346 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 CXXC4Q9H2H0 198 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 EPS8L2Q9H6S3 715 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 LRRC40Q9H9A6 602 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 SLC6A20Q9NP91 592 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 EURLQ9NYK6 297 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 CDC23Q9UJX2 597 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 JMJD1CQ15652 2540 aa9.03□□□□□ -0.96
SMARCE1-210ENST00000481231 ANKRD12Q6UB98 2062 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 A0A1B0GX78 115 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 RCCD1A6NED2 376 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 QSOX1O00391 747 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 SOCS6O14544 535 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 OR1I1O60431 355 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 WISP2O76076 250 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 TJP3O95049 919 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 AGAP20933 346 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 FOXN2P32314 431 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 RAB28P51157 221 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 SMSP52788 366 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 CSE1LP55060 971 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 PLOD1Q02809 727 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 SPA17Q15506 151 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 PARP6Q2NL67 630 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 CCDC38Q502W7 563 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 KIRREL2Q6UWL6 708 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 SHISA6Q6ZSJ9 500 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 TTLL10Q6ZVT0 673 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 COX15Q7KZN9 410 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 CXXC5Q7LFL8 322 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 OVCH1Q7RTY7 1134 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 TC2NQ8N9U0 490 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 LINC01555Q8NAE3 123 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 RNF214Q8ND24 703 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 DLG3Q92796 817 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 NACC2Q96BF6 587 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 ALS2CR12Q96Q35 445 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 SPSB2Q99619 263 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 FOXC2Q99958 501 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 TRIM56Q9BRZ2 755 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 WDR54Q9H977 334 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 CCM2LQ9NUG4 571 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 IMPACTQ9P2X3 320 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 CTSFQ9UBX1 484 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 SEC14L3Q9UDX4 400 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 CIDEBQ9UHD4 219 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 HS3ST3B1Q9Y662 390 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 DUSP10Q9Y6W6 482 aa9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 FLNAP21333 2647 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 NSD1Q96L73 2696 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-210ENST00000481231 NBEAL1Q6ZS30 2694 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 SNRNP200O75643 2136 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 DSCR3O14972 297 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 SLC19A2O60779 497 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 ZNF189O75820 626 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 ONECUT2O95948 504 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 OR56A5P0C7T3 313 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 ESRRAP11474 423 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 MCM3P25205 808 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 GRIA3P42263 894 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 ARSFP54793 590 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 RWDD2BP57060 319 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 GRB7Q14451 532 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 CEBPEQ15744 281 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 NKG7Q16617 165 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 DNAJC21Q5F1R6 531 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 IRAK1BP1Q5VVH5 260 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 TMEM198Q66K66 360 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 RPUSD3Q6P087 351 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 TAX1BP1Q86VP1 789 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 VRK3Q8IV63 474 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 CCDC170Q8IYT3 715 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 SLC22A15Q8IZD6 547 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 DTWD1Q8N5C7 304 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 TAB3Q8N5C8 712 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 C2orf73Q8N5S3 287 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 OR13J1Q8NGT2 312 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 SPATA3Q8NHX4 192 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 ADAMTS18Q8TE60 1221 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 IL17FQ96PD4 163 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 TREX2Q9BQ50 279 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 MESP1Q9BRJ9 268 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 MENTQ9BUN1 341 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 SLC26A1Q9H2B4 701 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 LUC7LQ9NQ29 371 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 CUTCQ9NTM9 273 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 TNFRSF10DQ9UBN6 386 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 SLC2A6Q9UGQ3 507 aa9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 R3HDM2Q9Y2K5 976 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-210ENST00000481231 CSPG4Q6UVK1 2322 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 VPS13CQ709C8 3753 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 KDM1AO60341 852 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 KLHL18O94889 574 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 F10P00742 488 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 ALBP02768 609 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 CD9P21926 228 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 CCR7P32248 378 aa9□□□□□ -0.97
SMARCE1-210ENST00000481231 CYLC1P35663 651 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms