RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 KCNA7Q96RP8 456 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 LRFN3Q9BTN0 628 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 ACTR8Q9H981 624 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 GPRC5BQ9NZH0 403 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 DCTN4Q9UJW0 460 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 RNF11Q9Y3C5 154 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 DYRK1BQ9Y463 629 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 TIMM22Q9Y584 194 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 PCDHGA5Q9Y5G8 931 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 USH1CQ9Y6N9 552 aa17■□□□□ 0.31
UPF3A-206ENST00000480362 SLCO1B7G3V0H7 640 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 MATN2O00339 956 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 ZNF195O14628 629 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 PRAMEF4O60810 478 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 CLDN9O95484 217 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 SYPP08247 313 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 GIMD1P0DJR0 217 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 SERPINB3P29508 390 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 AQP5P55064 265 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 CHIT1Q13231 466 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 GKAP1Q5VSY0 366 aaPredicted RBP16.99■□□□□ 0.31
UPF3A-206ENST00000480362 PRAMEF9Q5VWM5 478 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 TMEM26Q6ZUK4 368 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 KANSL1Q7Z3B3 1105 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 C17orf82Q86X59 251 aaPredicted RBP16.99■□□□□ 0.31
UPF3A-206ENST00000480362 GATAD2AQ86YP4 633 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 RBM12BQ8IXT5 1001 aaKnown RBP16.99■□□□□ 0.31
UPF3A-206ENST00000480362 CDYL2Q8N8U2 506 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 AVL9Q8NBF6 648 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 FAR2Q96K12 515 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 HAUS8Q9BT25 410 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 NUSAP1Q9BXS6 441 aaKnown RBP16.99■□□□□ 0.31
UPF3A-206ENST00000480362 SRMSQ9H3Y6 488 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 SMOC1Q9H4F8 434 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 KCNK13Q9HB14 408 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 OR6C2Q9NZP2 312 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.99■□□□□ 0.31
UPF3A-206ENST00000480362 VTI1BQ9UEU0 232 aa16.99■□□□□ 0.31
UPF3A-206ENST00000480362 E7EQ34 232 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 PPM1DO15297 605 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 HDAC3O15379 428 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 YKT6O15498 198 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 ENO1P06733 434 aaKnown RBP16.98■□□□□ 0.31
UPF3A-206ENST00000480362 UROSP10746 265 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 HGFP14210 728 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 ALOX15P16050 662 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-206ENST00000480362 GNAZP19086 355 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 IRF8Q02556 426 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 PCDH1Q08174 1060 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 UGT3A2Q3SY77 523 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 C14orf28Q4W4Y0 310 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 XKR6Q5GH73 641 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 C6orf132Q5T0Z8 1188 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-206ENST00000480362 KANK2Q63ZY3 851 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 MAVSQ7Z434 540 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 MYLK4Q86YV6 388 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-206ENST00000480362 GPR156Q8NFN8 814 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 OR2I1PQ8NGU4 316 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 METTL6Q8TCB7 284 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 SAP25Q8TEE9 199 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 NEIL2Q969S2 332 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 ACAT2Q9BWD1 397 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 PCBD2Q9H0N5 130 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 STN1Q9H668 368 aaKnown RBP16.98■□□□□ 0.31
UPF3A-206ENST00000480362 TAC3Q9UHF0 121 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 TRPS1Q9UHF7 1281 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 GMEB2Q9UKD1 530 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 SH2B3Q9UQQ2 575 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 PCDHB11Q9Y5F2 797 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 ADAMTS9Q9P2N4 1935 aa16.98■□□□□ 0.31
UPF3A-206ENST00000480362 PI4KAP42356 2102 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 A0A0G2JND7 137 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 BTN3A3O00478 584 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 KHNYNO15037 678 aaKnown RBP16.97■□□□□ 0.31
UPF3A-206ENST00000480362 PRICKLE3O43900 615 aaPredicted RBP16.97■□□□□ 0.31
UPF3A-206ENST00000480362 SKAP2O75563 359 aaPredicted RBP16.97■□□□□ 0.31
UPF3A-206ENST00000480362 CER1O95813 267 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 CAPN1P07384 714 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 CHRM5P08912 532 aaPredicted RBP16.97■□□□□ 0.31
UPF3A-206ENST00000480362 PSMB5P28074 263 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 HMOX2P30519 316 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 FASLGP48023 281 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 ARFIP2P53365 341 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 BIRC2Q13490 618 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 DOC2AQ14183 400 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 PDCD2Q16342 344 aaPredicted RBP16.97■□□□□ 0.31
UPF3A-206ENST00000480362 LIPJQ5W064 366 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 LAIR1Q6GTX8 287 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 SLCO4C1Q6ZQN7 724 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 ZNF761Q86XN6 746 aaPredicted RBP16.97■□□□□ 0.31
UPF3A-206ENST00000480362 ADGRF3Q8IZF5 1079 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 L3MBTL4Q8NA19 623 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 C10orf82Q8WW14 230 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 SLC5A11Q8WWX8 675 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 SEC16BQ96JE7 1060 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 SIKE1Q9BRV8 207 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 GTPBP2Q9BX10 602 aaKnown RBP16.97■□□□□ 0.31
UPF3A-206ENST00000480362 TMEM120AQ9BXJ8 343 aa16.97■□□□□ 0.31
UPF3A-206ENST00000480362 NUF2Q9BZD4 464 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms