RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CCNDBP1O95273 360 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 CCL4P13236 92 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 TFEBP19484 476 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 ITIH1P19827 911 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 RPA3P35244 121 aaPredicted RBP19.02■□□□□ 0.64
LIME1-205ENST00000480139 ARL4DP49703 201 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 TBPL1P62380 186 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 TSNAXIP1Q2TAA8 658 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 TMTC4Q5T4D3 741 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 KLC3Q6P597 504 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 SUSD1Q6UWL2 747 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 CLEC14AQ86T13 490 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 TRIM73Q86UV7 250 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 LCA5Q86VQ0 697 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 GPSM1Q86YR5 675 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 TCAIMQ8N3R3 496 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 C19orf47Q8N9M1 422 aaKnown RBP19.02■□□□□ 0.64
LIME1-205ENST00000480139 PPFIBP2Q8ND30 876 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 OR56A3Q8NH54 315 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 ACMSDQ8TDX5 336 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 NXNL1Q96CM4 212 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 GPR78Q96P69 363 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 TAAR9Q96RI9 348 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 DDA1Q9BW61 102 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 SGPP1Q9BX95 441 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 ROPN1BQ9BZX4 212 aaPredicted RBP19.02■□□□□ 0.64
LIME1-205ENST00000480139 UNKQ9C0B0 810 aaKnown RBP19.02■□□□□ 0.64
LIME1-205ENST00000480139 ROPN1Q9HAT0 212 aaPredicted RBP19.02■□□□□ 0.64
LIME1-205ENST00000480139 PDE7BQ9NP56 450 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 ASCL3Q9NQ33 180 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 SOHLH2Q9NX45 425 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 PCDHGA7Q9Y5G6 932 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 AK5Q9Y6K8 562 aa19.02■□□□□ 0.64
LIME1-205ENST00000480139 CDRT15L2A8MXV6 281 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 TARM1B6A8C7 271 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 TNFSF15O95150 251 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 GUCA1CO95843 209 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 PVRP15151 417 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 PSMB5P28074 263 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 RBMS1P29558 406 aaKnown RBP19.01■□□□□ 0.63
LIME1-205ENST00000480139 CMPK1P30085 196 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 GMPRP36959 345 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ETV5P41161 510 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ERVPABLB-1P60509 514 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ABATP80404 500 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ACY1Q03154 408 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 PRDX1Q06830 199 aaKnown RBP19.01■□□□□ 0.63
LIME1-205ENST00000480139 IL11RAQ14626 422 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ZXDCQ2QGD7 858 aaPredicted RBP19.01■□□□□ 0.63
LIME1-205ENST00000480139 BPHLQ86WA6 291 aaPredicted RBP19.01■□□□□ 0.63
LIME1-205ENST00000480139 KLHDC8AQ8IYD2 350 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 PDPRQ8NCN5 879 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 EPS8L3Q8TE67 593 aaKnown RBP19.01■□□□□ 0.63
LIME1-205ENST00000480139 ZUFSPQ96AP4 578 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 TEFMQ96QE5 360 aaKnown RBP19.01■□□□□ 0.63
LIME1-205ENST00000480139 ATOH8Q96SQ7 321 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ZPBPQ9BS86 351 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 TMEM109Q9BVC6 243 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ASPSCR1Q9BZE9 553 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ALG9Q9H6U8 611 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 ANKMY1Q9P2S6 941 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 TBK1Q9UHD2 729 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 RNF112Q9ULX5 631 aa19.01■□□□□ 0.63
LIME1-205ENST00000480139 SYCE1LA8MT33 242 aa19■□□□□ 0.63
LIME1-205ENST00000480139 NVLO15381 856 aaKnown RBP19■□□□□ 0.63
LIME1-205ENST00000480139 BRINP1O60477 761 aa19■□□□□ 0.63
LIME1-205ENST00000480139 MAGP20916 626 aa19■□□□□ 0.63
LIME1-205ENST00000480139 GRIA3P42263 894 aa19■□□□□ 0.63
LIME1-205ENST00000480139 SLCO1A2P46721 670 aa19■□□□□ 0.63
LIME1-205ENST00000480139 MAPK10P53779 464 aa19■□□□□ 0.63
LIME1-205ENST00000480139 IFFO1Q0D2I5 559 aa19■□□□□ 0.63
LIME1-205ENST00000480139 NAE1Q13564 534 aa19■□□□□ 0.63
LIME1-205ENST00000480139 TMEM164Q5U3C3 297 aa19■□□□□ 0.63
LIME1-205ENST00000480139 PRAMEF13Q5VWM6 474 aa19■□□□□ 0.63
LIME1-205ENST00000480139 KIAA1614Q5VZ46 1190 aa19■□□□□ 0.63
LIME1-205ENST00000480139 ICE2Q659A1 982 aa19■□□□□ 0.63
LIME1-205ENST00000480139 CAPN13Q6MZZ7 669 aaPredicted RBP19■□□□□ 0.63
LIME1-205ENST00000480139 FOXR1Q6PIV2 292 aa19■□□□□ 0.63
LIME1-205ENST00000480139 PLD6Q8N2A8 252 aaKnown RBP19■□□□□ 0.63
LIME1-205ENST00000480139 OR8K5Q8NH50 307 aa19■□□□□ 0.63
LIME1-205ENST00000480139 OR2W6PQ8NHA6 318 aa19■□□□□ 0.63
LIME1-205ENST00000480139 HNRNPLLQ8WVV9 542 aaKnown RBP19■□□□□ 0.63
LIME1-205ENST00000480139 RHBDF1Q96CC6 855 aa19■□□□□ 0.63
LIME1-205ENST00000480139 ZNF578Q96N58 590 aaPredicted RBP19■□□□□ 0.63
LIME1-205ENST00000480139 MIPEPQ99797 713 aa19■□□□□ 0.63
LIME1-205ENST00000480139 EGFL8Q99944 293 aa19■□□□□ 0.63
LIME1-205ENST00000480139 ATG10Q9H0Y0 220 aa19■□□□□ 0.63
LIME1-205ENST00000480139 THSD1Q9NS62 852 aa19■□□□□ 0.63
LIME1-205ENST00000480139 SLC39A1Q9NY26 324 aa19■□□□□ 0.63
LIME1-205ENST00000480139 NUDT4Q9NZJ9 180 aa19■□□□□ 0.63
LIME1-205ENST00000480139 TAC3Q9UHF0 121 aa19■□□□□ 0.63
LIME1-205ENST00000480139 POLR1CO15160 346 aaPredicted RBP18.99■□□□□ 0.63
LIME1-205ENST00000480139 IPO13O94829 963 aaKnown RBP18.99■□□□□ 0.63
LIME1-205ENST00000480139 CAPNS1P04632 268 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 EBLN1P0CF75 366 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 FGF5P12034 268 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 FOLR1P15328 257 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 GGT5P36269 586 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 SH3BP2P78314 561 aa18.99■□□□□ 0.63
LIME1-205ENST00000480139 TUBB3Q13509 450 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms