RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 S1PR4O95977 384 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 CD9P21926 228 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 EMP2P54851 167 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 TLE4Q04727 773 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 DNAJC21Q5F1R6 531 aaKnown RBP16.38■□□□□ 0.21
VIM-204ENST00000478746 ANKRD20A2Q5SQ80 823 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 ANKRD20A1Q5TYW2 823 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 ANKRD20A3Q5VUR7 823 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 PRMT9Q6P2P2 845 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 TAX1BP1Q86VP1 789 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 ZUFSPQ96AP4 578 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 CDKN2AIPNLQ96HQ2 116 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 SPOCK3Q9BQ16 436 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 ARNT2Q9HBZ2 717 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 ZC3H7BQ9UGR2 993 aaKnown RBP16.38■□□□□ 0.21
VIM-204ENST00000478746 TINAGQ9UJW2 476 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.38■□□□□ 0.21
VIM-204ENST00000478746 NIPBLQ6KC79 2804 aaeCLIP16.37■□□□□ 0.21
VIM-204ENST00000478746 CACNA1CQ13936 2221 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 hCG_1818297A0A087WSY0 165 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 TARM1B6A8C7 271 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 WISP2O76076 250 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 ZRANB2O95218 330 aaKnown RBP eCLIP16.37■□□□□ 0.21
VIM-204ENST00000478746 OR56A5P0C7T3 313 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 CSE1LP55060 971 aaKnown RBP16.37■□□□□ 0.21
VIM-204ENST00000478746 TPM4P67936 248 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 SPARCL1Q14515 664 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 CDSNQ15517 529 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 RIPOR1Q6ZS17 1223 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 ARHGEF18Q6ZSZ5 1173 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 CCDC50Q8IVM0 306 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 RCOR2Q8IZ40 523 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 LRRC45Q96CN5 670 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 RNF32Q9H0A6 362 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 MCCC2Q9HCC0 563 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 GPAMQ9HCL2 828 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 STMN3Q9NZ72 180 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 IMPACTQ9P2X3 320 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 CIDEBQ9UHD4 219 aa16.37■□□□□ 0.21
VIM-204ENST00000478746 IGHV1-45A0A0A0MS14 117 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 OR5H15A6NDH6 313 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 PSTPIP1O43586 416 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 MED26O95402 600 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 CELA2AP08217 269 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 CD1EP15812 388 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 PMP22Q01453 160 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 EEF1A2Q05639 463 aaKnown RBP16.36■□□□□ 0.21
VIM-204ENST00000478746 ITIH4Q14624 930 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 ABHD17BQ5VST6 288 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 HIBCHQ6NVY1 386 aaPredicted RBP16.36■□□□□ 0.21
VIM-204ENST00000478746 OR2L8Q8NGY9 312 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 CFAP61Q8NHU2 1237 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 STYXQ8WUJ0 223 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 MAGED4Q96JG8 741 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 IL17FQ96PD4 163 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 ALS2CR12Q96Q35 445 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 MENTQ9BUN1 341 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 YIPF2Q9BWQ6 316 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 HEMGNQ9BXL5 484 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 RIC8BQ9NVN3 520 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 STOX2Q9P2F5 926 aaPredicted RBP16.36■□□□□ 0.21
VIM-204ENST00000478746 NEU2Q9Y3R4 380 aa16.36■□□□□ 0.21
VIM-204ENST00000478746 IGLV3-12A0A075B6K2 115 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 IDSB3KWA1 339 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 CTSVO60911 334 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 STK10O94804 968 aaKnown RBP16.35■□□□□ 0.21
VIM-204ENST00000478746 RPN2P04844 631 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 EIF2S1P05198 315 aaKnown RBP16.35■□□□□ 0.21
VIM-204ENST00000478746 ITGAMP11215 1152 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 ICAM2P13598 275 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 TPH1P17752 444 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 FBLP22087 321 aaKnown RBP16.35■□□□□ 0.21
VIM-204ENST00000478746 AP2B1P63010 937 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 LONRF1Q17RB8 773 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 CCDC181Q5TID7 509 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 FRMPD2BQ6IN97 320 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 PACS1Q6VY07 963 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 PPP1R2P1Q96PQ5 205 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 SLC39A10Q9ULF5 831 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 ZNF835Q9Y2P0 537 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 MEMO1Q9Y316 297 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 ALG6Q9Y672 507 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 FAM169AQ9Y6X4 670 aa16.35■□□□□ 0.21
VIM-204ENST00000478746 A0A0J9YVX5 310 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 A0A1W2PQ72 361 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 F8W8V4 182 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 APOC4-APOC2K7ER74 178 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 FKBP9O95302 570 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 APOC2P02655 101 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 HEXBP07686 556 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 HSPA14Q0VDF9 509 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 MUM1Q2TAK8 710 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 KRTCAP3Q53RY4 240 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 ZNF766Q5HY98 468 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 BBS12Q6ZW61 710 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 SPPL2CQ8IUH8 684 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 KATNAL2Q8IYT4 538 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 SLC22A15Q8IZD6 547 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 OR8K1Q8NGG5 319 aa16.34■□□□□ 0.21
VIM-204ENST00000478746 THAP3Q8WTV1 239 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms