RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 MYO1HQ8N1T3 1032 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 PPFIBP2Q8ND30 876 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 OR2L3Q8NG85 312 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 CT55Q8WUE5 264 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 SMPDL3AQ92484 453 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 TTC9Q92623 222 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 EFHD1Q9BUP0 239 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 ACTR5Q9H9F9 607 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-206ENST00000478214 ZDHHC18Q9NUE0 388 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 INTS7Q9NVH2 962 aaKnown RBP14.99□□□□□ -0.01
HMGA1-206ENST00000478214 NSMCE4AQ9NXX6 385 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 DMGDHQ9UI17 866 aaKnown RBP14.99□□□□□ -0.01
HMGA1-206ENST00000478214 PLCL2Q9UPR0 1127 aa14.99□□□□□ -0.01
HMGA1-206ENST00000478214 ATMQ13315 3056 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 FAM95CA0A1B0GW59 222 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 ZNF891A8MT65 544 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-206ENST00000478214 E7ENX8 843 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 H3BMH7 237 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 ZNF749O43361 778 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 NRP2O60462 931 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 KATNA1O75449 491 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 OR2B3O76000 313 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 FKBP9O95302 570 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 C1QAP02745 245 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 TCN2P20062 427 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 RPA3P35244 121 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-206ENST00000478214 RORAP35398 523 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 HSD17B2P37059 387 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 IL2P60568 153 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 TAP2Q03519 686 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 DNASE1L3Q13609 305 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 LCN10Q6JVE6 187 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 MCATQ8IVS2 390 aaKnown RBP14.98□□□□□ -0.01
HMGA1-206ENST00000478214 SYTL1Q8IYJ3 562 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 STARD8Q92502 1023 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 MR1Q95460 341 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 CLIP3Q96DZ5 547 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 LRFN5Q96NI6 719 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 RUFY1Q96T51 708 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 MCMBPQ9BTE3 642 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 CHST8Q9H2A9 424 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 RHOJQ9H4E5 214 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 PCMTD2Q9NV79 361 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 EURLQ9NYK6 297 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 PDE10AQ9Y233 779 aa14.98□□□□□ -0.01
HMGA1-206ENST00000478214 SNRNP200O75643 2136 aaKnown RBP14.98□□□□□ -0.01
HMGA1-206ENST00000478214 FAM159BA6NKW6 160 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 ZNF839A8K0R7 811 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 ERVH48-1M5A8F1 160 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 MEN1O00255 615 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 CTSVO60911 334 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 KLK3P07288 261 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-206ENST00000478214 C8GP07360 202 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 GSTA2P09210 222 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 PRKAR1AP10644 381 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 IMPA1P29218 277 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 CMPK1P30085 196 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 TAS2R39P59534 338 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 ZNF460Q14592 562 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 PHKG1Q16816 387 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 TAF1BQ53T94 588 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-206ENST00000478214 ATP1A1-AS1Q5TC04 95 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 TMEM207Q6UWW9 146 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 ZNF517Q6ZMY9 492 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-206ENST00000478214 MBOAT1Q6ZNC8 495 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 CYS1Q717R9 158 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 LRRC56Q8IYG6 542 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-206ENST00000478214 DSELQ8IZU8 1212 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 ZNF655Q8N720 491 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-206ENST00000478214 MCOLN3Q8TDD5 553 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 CDKL2Q92772 493 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 EXTL1Q92935 676 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 ZUFSPQ96AP4 578 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 VPS39Q96JC1 886 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 SLC7A5P2Q9GIP4 190 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 PARVBQ9HBI1 364 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 LRRC4CQ9HCJ2 640 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 SLC6A20Q9NP91 592 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 ABCF3Q9NUQ8 709 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 IRAK4Q9NWZ3 460 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 TAC3Q9UHF0 121 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 MTO1Q9Y2Z2 717 aaKnown RBP14.97□□□□□ -0.01
HMGA1-206ENST00000478214 KLK4Q9Y5K2 254 aa14.97□□□□□ -0.01
HMGA1-206ENST00000478214 TARM1B6A8C7 271 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 C21orf140B9A014 251 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 ATXN7O15265 892 aaPredicted RBP14.96□□□□□ -0.01
HMGA1-206ENST00000478214 SLC16A5O15375 505 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 ZSCAN9O15535 394 aaPredicted RBP14.96□□□□□ -0.01
HMGA1-206ENST00000478214 ATRXP46100 2492 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 SP140Q13342 867 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 TBR1Q16650 682 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 PTCHD3Q3KNS1 767 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 ZC3H12BQ5HYM0 836 aaKnown RBP14.96□□□□□ -0.01
HMGA1-206ENST00000478214 C16orf46Q6P387 395 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 CTAGE3PQ8IX95 158 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 CCDC138Q96M89 665 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 DPH7Q9BTV6 452 aa14.96□□□□□ -0.01
HMGA1-206ENST00000478214 MRPS30Q9NP92 439 aaKnown RBP14.96□□□□□ -0.01
HMGA1-206ENST00000478214 STOX2Q9P2F5 926 aaPredicted RBP14.96□□□□□ -0.01
HMGA1-206ENST00000478214 TXNDC16Q9P2K2 825 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms