RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 ATP1A3P13637 1013 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 CDH3P22223 829 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 ACHEP22303 614 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 MATKP42679 507 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 GSK3BP49841 420 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 RIDAP52758 137 aaKnown RBP0.61□□□□□ -2.31
CALD1-218ENST00000478075 SRPXP78539 464 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 GCNT1Q02742 428 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 TRA2AQ13595 282 aaKnown RBP eCLIP0.61□□□□□ -2.314e-8■■■■■ 35.7
CALD1-218ENST00000478075 SIX1Q15475 284 aaPredicted RBP0.61□□□□□ -2.31
CALD1-218ENST00000478075 LTB4RQ15722 352 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 FBXO47Q5MNV8 452 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 KRT39Q6A163 491 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 MKXQ8IYA7 352 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 HJURPQ8NCD3 748 aaPredicted RBP0.61□□□□□ -2.31
CALD1-218ENST00000478075 SIPA1Q96FS4 1042 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 BTBD10Q9BSF8 475 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 C1QTNF1Q9BXJ1 281 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 PNNQ9H307 717 aaKnown RBP0.61□□□□□ -2.31
CALD1-218ENST00000478075 MARCH7Q9H992 704 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 PLSCR3Q9NRY6 295 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 FAM207AQ9NSI2 230 aaPredicted RBP0.61□□□□□ -2.31
CALD1-218ENST00000478075 BAIAP2L1Q9UHR4 511 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 MKLN1Q9UL63 735 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 R3HDM2Q9Y2K5 976 aaKnown RBP0.61□□□□□ -2.31
CALD1-218ENST00000478075 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP0.61□□□□□ -2.313e-6■■■□□ 18.4
CALD1-218ENST00000478075 GTF3C1Q12789 2109 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 A0A1B0GTH9 108 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 HYKKA2RU49 373 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 LRCOL1A6NCL2 159 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 RPL37AP8A6NKH3 93 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 TO15178 435 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 VILLO15195 856 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 TLX2O43763 284 aaPredicted RBP0.6□□□□□ -2.31
CALD1-218ENST00000478075 DDHD2O94830 711 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 GH2P01242 217 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 IFIT1P09914 478 aaKnown RBP0.6□□□□□ -2.31
CALD1-218ENST00000478075 CD1EP15812 388 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 FASP25445 335 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 PMELP40967 661 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 OR3A2P47893 321 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 ARSEP51690 589 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 LBX1P52954 281 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 SNRPEP62304 92 aaKnown RBP0.6□□□□□ -2.31
CALD1-218ENST00000478075 NAAAQ02083 359 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 UBE3AQ05086 875 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 GALNT2Q10471 571 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 KIAA0141Q14154 515 aaPredicted RBP0.6□□□□□ -2.31
CALD1-218ENST00000478075 PTPN14Q15678 1187 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 UPP1Q16831 310 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 KCTD19Q17RG1 926 aaPredicted RBP0.6□□□□□ -2.31
CALD1-218ENST00000478075 ISXQ2M1V0 245 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 GRAMD1BQ3KR37 738 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 ZNF506Q5JVG8 444 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 SLC35D3Q5M8T2 416 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 AGBL2Q5U5Z8 902 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 CDC73Q6P1J9 531 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 COMMD2Q86X83 199 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 CDK20Q8IZL9 346 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 OR2L5Q8NG80 312 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 TBC1D16Q8TBP0 767 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 KIAA1524Q8TCG1 905 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 ADAMTS16Q8TE57 1224 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 SLC22A18Q96BI1 424 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 ZBTB10Q96DT7 871 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 C2orf48Q96LS8 159 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 MAGEB18Q96M61 343 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 MAP7D2Q96T17 732 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 CDX2Q99626 313 aaPredicted RBP0.6□□□□□ -2.31
CALD1-218ENST00000478075 PYM1Q9BRP8 204 aaKnown RBP0.6□□□□□ -2.31
CALD1-218ENST00000478075 HGH1Q9BTY7 390 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 MTMR12Q9C0I1 747 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 MIS12Q9H081 205 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.6□□□□□ -2.31
CALD1-218ENST00000478075 SELENOKQ9Y6D0 94 aa0.6□□□□□ -2.31
CALD1-218ENST00000478075 ARHGAP21Q5T5U3 1957 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 IGLV3-16A0A075B6K0 115 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 H3BQ06 376 aaPredicted RBP0.59□□□□□ -2.31
CALD1-218ENST00000478075 OGG1O15527 345 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 TNFSF14O43557 240 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 NDUFS3O75489 264 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 STAM2O75886 525 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 BAIAP3O94812 1187 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 KBTBD11O94819 623 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 ACSL3O95573 720 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 WDPCPO95876 746 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 QDPRP09417 244 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 VDRP11473 427 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 DARSP14868 501 aaKnown RBP0.59□□□□□ -2.31
CALD1-218ENST00000478075 SERPINB3P29508 390 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 CSTF2P33240 577 aaKnown RBP eCLIP0.59□□□□□ -2.31
CALD1-218ENST00000478075 CCR3P51677 355 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 TAF10Q12962 218 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 PTP4A2Q12974 167 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 CCNG2Q16589 344 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 ODF4Q2M2E3 257 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 PRICKLE4Q2TBC4 344 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 DPCR1Q3MIW9 517 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 SPDYCQ5MJ68 293 aa0.59□□□□□ -2.31
CALD1-218ENST00000478075 CGB2Q6NT52 195 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms