RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 GPR63Q9BZJ6 419 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 RBM38Q9H0Z9 239 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 P2RY12Q9H244 342 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SEMA6AQ9H2E6 1030 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 NOL11Q9H8H0 719 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 IL1RL2Q9HB29 575 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 MAGEE1Q9HCI5 957 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SLC52A3Q9NQ40 469 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 HEBP1Q9NRV9 189 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 CMTM6Q9NX76 183 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TUBA8Q9NY65 449 aaPredicted RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 LHX3Q9UBR4 397 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 GIMAP2Q9UG22 337 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 EIF2B4Q9UI10 523 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ANAPC2Q9UJX6 822 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 STOML2Q9UJZ1 356 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PTBP2Q9UKA9 531 aaKnown RBP4.84□□□□□ -1.63
SF3B6-202ENST00000478050 APPL1Q9UKG1 709 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 IKZF3Q9UKT9 509 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SLC8A2Q9UPR5 921 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 DHRS7Q9Y394 339 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 RNF11Q9Y3C5 154 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PKP3Q9Y446 797 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF711Q9Y462 761 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 TIMM22Q9Y584 194 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 PTGDR2Q9Y5Y4 395 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 ACTL7AQ9Y615 435 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 SLC30A1Q9Y6M5 507 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 USP34Q70CQ2 3546 aa4.84□□□□□ -1.63
SF3B6-202ENST00000478050 MTCL1Q9Y4B5 1905 aaKnown RBP4.84□□□□□ -1.64
SF3B6-202ENST00000478050 EP300Q09472 2414 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 A0A087WXM4 84 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TCRBV5S2A0A599 114 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ASPDHA6ND91 283 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CCDC160A6NGH7 325 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 OTOL1A6NHN0 477 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 NCF1BA6NI72 391 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SAC3D1A6NKF1 404 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TRIM64CA6NLI5 447 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 NCF1CA8MVU1 366 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 NT5C1B-RDH14C9J2C7 533 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 H0Y626 953 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PDLIM1O00151 329 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ARNTLO00327 626 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SLC28A1O00337 649 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 E2F3O00716 465 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SOCS2O14508 198 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 VILLO15195 856 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ADAM12O43184 909 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SUSD5O60279 629 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SYNCRIPO60506 623 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TSPAN3O60637 253 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TBL1XO60907 577 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SOCS5O75159 536 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TULP3O75386 442 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ABLIM3O94929 683 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 OR6B1O95007 311 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PGLSO95336 258 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 BMP10O95393 424 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PARNO95453 639 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 EFEMP2O95967 443 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 GLUD1P00367 558 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 OTCP00480 354 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 C1RP00736 705 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 KLKB1P03952 638 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ENO2P09104 434 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 IRF1P10914 325 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 NCF1P14598 390 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ATP6V1B1P15313 513 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CKMT2P17540 419 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CHRM3P20309 590 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ITGALP20701 1170 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 MYF6P23409 242 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 DGKAP23743 735 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PRDX3P30048 256 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 HMOX2P30519 316 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 OR1D2P34982 312 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 RFC2P35250 354 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 HMGCLP35914 325 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ZFP36L2P47974 494 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ALDH3B2P48448 385 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CSNK1DP48730 415 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CDKN1CP49918 316 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 AGTR2P50052 363 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CCT8P50990 548 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SGSHP51688 502 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 HK3P52790 923 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 DIO3P55073 304 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 RHOAP61586 193 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 UFM1P61960 85 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ECT2LQ008S8 904 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 EMX2Q04743 252 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 LIPEQ05469 1076 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PRKG2Q13237 762 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 MAD2L1Q13257 205 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PLD1Q13393 1074 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 GTF2H2Q13888 395 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CAPRIN1Q14444 709 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SLBPQ14493 270 aaKnown RBP eCLIP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms