RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	SLC30A3	Q99726	388 aa		13.25	□□□□□ -0.29
HDAC7-222	ENST00000477937	SELENOS	Q9BQE4	189 aa		13.25	□□□□□ -0.29
HDAC7-222	ENST00000477937	TRIM55	Q9BYV6	548 aa		13.25	□□□□□ -0.29
HDAC7-222	ENST00000477937	ING2	Q9H160	280 aa		13.25	□□□□□ -0.29
HDAC7-222	ENST00000477937	NDOR1	Q9UHB4	597 aa		13.25	□□□□□ -0.29
HDAC7-222	ENST00000477937	MED16	Q9Y2X0	877 aa		13.25	□□□□□ -0.29
HDAC7-222	ENST00000477937	TLN1	Q9Y490	2541 aa	Known RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937		A0A1W2PPV9	198 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	ZNF839	A8K0R7	811 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	CCDC188	H7C350	402 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	MYO1C	O00159	1063 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	SMAP	O00193	183 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	SRPX2	O60687	465 aa	Predicted RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	VPS26A	O75436	327 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	KLF7	O75840	302 aa	Predicted RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	MPC1L	P0DKB6	136 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	ATXN8OS	P0DMR3	200 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	ERVK-10	P10266	1014 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	ERG	P11308	486 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	PIM1	P11309	404 aa	Predicted RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	IVD	P26440	423 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	CMPK1	P30085	196 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	RPA3	P35244	121 aa	Predicted RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	CASR	P41180	1078 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	CCL11	P51671	97 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	RRAD	P55042	308 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	MPP1	Q00013	466 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	CUL1	Q13616	776 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	FASTK	Q14296	549 aa	Known RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	SSPN	Q14714	243 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	GRM7	Q14831	915 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	FAM214A	Q32MH5	1076 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	BBS9	Q3SYG4	887 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	CPZ	Q66K79	652 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	UGT3A1	Q6NUS8	523 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	TTLL10	Q6ZVT0	673 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	ASB18	Q6ZVZ8	466 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	MED25	Q71SY5	747 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	RAB43	Q86YS6	212 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	PDIK1L	Q8N165	341 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	TTC29	Q8NA56	475 aa	Predicted RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	GIMAP7	Q8NHV1	300 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	IP6K3	Q96PC2	410 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	GPR21	Q99679	349 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	AARSD1	Q9BTE6	412 aa	Known RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	ACAT2	Q9BWD1	397 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	TRIM4	Q9C037	500 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	PYCARD	Q9ULZ3	195 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	KLK4	Q9Y5K2	254 aa		13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	HELZ2	Q9BYK8	2649 aa	Known RBP	13.24	□□□□□ -0.29
HDAC7-222	ENST00000477937	NUP210L	Q5VU65	1888 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937		A0A1B0GX78	115 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	PYCARD-AS1	I3L0S3	204 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937		K7EM74	188 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	EIF3F	O00303	357 aa	Predicted RBP	13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	ZBTB14	O43829	449 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	CTSV	O60911	334 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	BANF1	O75531	89 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	WISP1	O95388	367 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	NR1D1	P20393	614 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	FOLR3	P41439	243 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	CSRP3	P50461	194 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	PNLIPRP1	P54315	467 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	KCNC4	Q03721	635 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	TLE1	Q04724	770 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	KLRB1	Q12918	225 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	CHAF1B	Q13112	559 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	TSTA3	Q13630	321 aa	Predicted RBP	13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	SLC9A5	Q14940	896 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	MORF4L2	Q15014	288 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	MSS51	Q4VC12	460 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	SUSD1	Q6UWL2	747 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	CYHR1	Q6ZMK1	362 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	TEX19	Q8NA77	164 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	CD200R1	Q8TD46	325 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	ASB11	Q8WXH4	323 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	PKP4	Q99569	1192 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	DPH7	Q9BTV6	452 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	SLC25A23	Q9BV35	468 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	MRPS30	Q9NP92	439 aa	Known RBP	13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	CUTC	Q9NTM9	273 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	RNF14	Q9UBS8	474 aa		13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	TRMT6	Q9UJA5	497 aa	Known RBP	13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	G3BP2	Q9UN86	482 aa	Known RBP	13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	PTRH2	Q9Y3E5	179 aa	Known RBP	13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.23	□□□□□ -0.29
HDAC7-222	ENST00000477937	BSN	Q9UPA5	3926 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937		A0A0J9YVX5	310 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	OR2A25	A4D2G3	310 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	FITM1	A5D6W6	292 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	GFY	I3L273	518 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	DSCR3	O14972	297 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	SLC16A8	O95907	504 aa		13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	SYF2	O95926	243 aa	Known RBP	13.22	□□□□□ -0.29
HDAC7-222	ENST00000477937	MCM3	P25205	808 aa		13.22	□□□□□ -0.29

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