RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 DUPD1Q68J44 220 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 ZNF549Q6P9A3 640 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 FAM198BQ6UWH4 519 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 OR9A1PQ8NGU1 263 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 CD200R1Q8TD46 325 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 ASB11Q8WXH4 323 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 N4BP2L2Q92802 583 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 MR1Q95460 341 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 FAM129AQ9BZQ8 928 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 SPRTNQ9H040 489 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 PCMTD2Q9NV79 361 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 GEMIN8Q9NWZ8 242 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 UTP6Q9NYH9 597 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 MOCS1Q9NZB8 636 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 CHMP2BQ9UQN3 213 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 MED16Q9Y2X0 877 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 SNX24Q9Y343 169 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 KCNMB2Q9Y691 235 aa13.29□□□□□ -0.28
SOX2-OT-208ENST00000477928 H3BMH7 237 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 SLC16A5O15375 505 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 RAD51CO43502 376 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 SLC28A2O43868 658 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 CCNDBP1O95273 360 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 AHSGP02765 367 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 CAPN1P07384 714 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 RAB40ALP0C0E4 278 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 ERVK-10P10266 1014 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 CYP2A7P20853 494 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 MAGP20916 626 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 RORAP35398 523 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 CCR10P46092 362 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 MPP1Q00013 466 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 MGAT5Q09328 741 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 PDIA2Q13087 525 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 FAM45BPQ6NSW5 357 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 CNSTQ6PJW8 725 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 IGDCC3Q8IVU1 814 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 DTWD1Q8N5C7 304 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 GIMAP7Q8NHV1 300 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 FAM45AQ8TCE6 357 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 PROKR1Q8TCW9 393 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 SMPDL3AQ92484 453 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 PWWP2AQ96N64 755 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 GPR21Q99679 349 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 TRIM55Q9BYV6 548 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 TRIM31Q9BZY9 425 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 PPANQ9NQ55 473 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 ZFATQ9P243 1243 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 TRMT6Q9UJA5 497 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 SRPK3Q9UPE1 567 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 PLCL2Q9UPR0 1127 aa13.28□□□□□ -0.28
SOX2-OT-208ENST00000477928 COL6A6A6NMZ7 2263 aa13.27□□□□□ -0.28
SOX2-OT-208ENST00000477928 MEN1O00255 615 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 ZNF749O43361 778 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 PDGFAP04085 211 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 C8GP07360 202 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 GRIA3P42263 894 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 CARSP49589 748 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 RPS15P62841 145 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 RELAQ04206 551 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 SLC9A5Q14940 896 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 SF1Q15637 639 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 TCTE1Q5JU00 501 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 CYHR1Q6ZMK1 362 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 CEP128Q6ZU80 1094 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 PALM2Q8IXS6 379 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 SYTL1Q8IYJ3 562 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 DSELQ8IZU8 1212 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 DNAJC22Q8N4W6 341 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 ENDOVQ8N8Q3 282 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 FBXO36Q8NEA4 188 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 PYROXD1Q8WU10 500 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 APOBEC4Q8WW27 367 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 ANKRD7Q92527 254 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 CDKL2Q92772 493 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 CLIP3Q96DZ5 547 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 ABHD17AQ96GS6 310 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 DHRS4Q9BTZ2 278 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 SLC7A5P2Q9GIP4 190 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 SLC25A18Q9H1K4 315 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 ADNPQ9H2P0 1102 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 ACTR5Q9H9F9 607 aaPredicted RBP13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 PLAC1Q9HBJ0 212 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 SLC17A6Q9P2U8 582 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 DHCR7Q9UBM7 475 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 TUBD1Q9UJT1 453 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 BSNQ9UPA5 3926 aa13.27□□□□□ -0.29
SOX2-OT-208ENST00000477928 ARHGEF33A8MVX0 844 aa13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 SRPX2O60687 465 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 CNOT3O75175 753 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 AGXTP21549 392 aa13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 HRH2P25021 359 aa13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 GABRB3P28472 473 aa13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 PTPN4P29074 926 aa13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 ARSFP54793 590 aa13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 ABATP80404 500 aa13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 C2orf54Q08AI8 447 aa13.26□□□□□ -0.29
SOX2-OT-208ENST00000477928 CUL1Q13616 776 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms