RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MYBL2P10244 700 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 TNNT1P13805 278 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 HOXB4P17483 251 aaPredicted RBP19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 CD9P21926 228 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 SLC1A1P43005 524 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 VSX2P58304 361 aaPredicted RBP19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 EEF1A2Q05639 463 aaKnown RBP19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 DNAJC21Q5F1R6 531 aaKnown RBP19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 PACS1Q6VY07 963 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 NAPRTQ6XQN6 538 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 ARHGEF18Q6ZSZ5 1173 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 THAP3Q8WTV1 239 aaPredicted RBP19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 GPAMQ9HCL2 828 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 NEU2Q9Y3R4 380 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 FAM169AQ9Y6X4 670 aa19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 MAP1AP78559 2803 aaPredicted RBP19.29■□□□□ 0.68
PDLIM1-202ENST00000477757 HYKKA2RU49 373 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 IDSB3KWA1 339 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 SRPX2O60687 465 aaPredicted RBP19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 CTSVO60911 334 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 FKBP9O95302 570 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 FBLP22087 321 aaKnown RBP19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 CXCR2P25025 360 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 PSMB4P28070 264 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 AP2B1P63010 937 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 ITIH4Q14624 930 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 WASHC2DQ5SRD0 308 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 ABHD17BQ5VST6 288 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 LAPTM4BQ86VI4 370 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 TAX1BP1Q86VP1 789 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 RHOT2Q8IXI1 618 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 OR2L8Q8NGY9 312 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 ARNT2Q9HBZ2 717 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 NLE1Q9NVX2 485 aaPredicted RBP19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 FEZ2Q9UHY8 353 aaPredicted RBP19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 HYOU1Q9Y4L1 999 aa19.28■□□□□ 0.68
PDLIM1-202ENST00000477757 hCG_1818297A0A087WSY0 165 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 ITGAMP11215 1152 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 RBL1P28749 1068 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 CSNK1G2P78368 415 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 LONRF1Q17RB8 773 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 ASTE1Q2TB18 679 aaPredicted RBP19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 MEX3BQ6ZN04 569 aaKnown RBP19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 DCUN1D3Q8IWE4 304 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 C2orf73Q8N5S3 287 aaPredicted RBP19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 LMNTD1Q8N9Z9 388 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 GPR137Q96N19 417 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 IL17FQ96PD4 163 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 TBL1YQ9BQ87 522 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 C10orf88Q9H8K7 445 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 C14orf105Q9NVL8 296 aa19.27■□□□□ 0.68
PDLIM1-202ENST00000477757 LOC102723996A0A087X1L8 192 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 TARM1B6A8C7 271 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 PSTPIP1O43586 416 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 SPOPO43791 374 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 EMP2P54851 167 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 GRB7Q14451 532 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 PRPSAP1Q14558 356 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 SF1Q15637 639 aaKnown RBP19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 FRMPD2BQ6IN97 320 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 NEK10Q6ZWH5 1172 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 SPPL2CQ8IUH8 684 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 SLC22A15Q8IZD6 547 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 ZUFSPQ96AP4 578 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 C10orf90Q96M02 699 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 ZNF700Q9H0M5 742 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 PCDHGB6Q9Y5F9 930 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 KLK4Q9Y5K2 254 aa19.26■□□□□ 0.67
PDLIM1-202ENST00000477757 NADKO95544 446 aaPredicted RBP19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 MLYCDO95822 493 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 RPN2P04844 631 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 COMTP21964 271 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 ART1P52961 327 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 ZNF33BQ06732 778 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 DSG2Q14126 1118 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 PCOLCEQ15113 449 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 MUM1Q2TAK8 710 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 KRTCAP3Q53RY4 240 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 ZNF766Q5HY98 468 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 NCCRP1Q6ZVX7 275 aaPredicted RBP19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 PHF10Q8WUB8 498 aaKnown RBP19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 CDKN2AIPNLQ96HQ2 116 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 ANP32EQ9BTT0 268 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 CIDEBQ9UHD4 219 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 TEKT2Q9UIF3 430 aa19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 ZNF469Q96JG9 3925 aaPredicted RBP19.25■□□□□ 0.67
PDLIM1-202ENST00000477757 H7C0C1 242 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 APOC4-APOC2K7ER74 178 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 RASGRF2O14827 1237 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 ZRANB2O95218 330 aaKnown RBP eCLIP19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 APOC2P02655 101 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 OR56A5P0C7T3 313 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 ICAM2P13598 275 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 ATP5OP48047 213 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 ANKRD20A2Q5SQ80 823 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 ANKRD20A1Q5TYW2 823 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 ANKRD20A3Q5VUR7 823 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 BBS12Q6ZW61 710 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 RNF44Q7L0R7 432 aa19.24■□□□□ 0.67
PDLIM1-202ENST00000477757 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms