RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 SLC38A9Q8NBW4 561 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 OR2L3Q8NG85 312 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 ZNF480Q8WV37 535 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 CCDC138Q96M89 665 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 MIPEPQ99797 713 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 DPH2Q9BQC3 489 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-205ENST00000477174 MCMBPQ9BTE3 642 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 TSPYL1Q9H0U9 437 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 RHOJQ9H4E5 214 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 ACTR5Q9H9F9 607 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-205ENST00000477174 ENAMQ9NRM1 1142 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 EURLQ9NYK6 297 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 IL17BQ9UHF5 180 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 CROTQ9UKG9 612 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 RALYQ9UKM9 306 aaKnown RBP12.92□□□□□ -0.34
ACTN4-205ENST00000477174 KLHL20Q9Y2M5 609 aa12.92□□□□□ -0.34
ACTN4-205ENST00000477174 SEC16AO15027 2179 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 KRT87PA6NCN2 255 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 FAM159BA6NKW6 160 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 E7ENX8 843 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 H3BMH7 237 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 ATXN7O15265 892 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-205ENST00000477174 ZNF749O43361 778 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 HCRTR1O43613 425 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 SRPX2O60687 465 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-205ENST00000477174 TSPAN12O95859 305 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 SYF2O95926 243 aaKnown RBP12.91□□□□□ -0.34
ACTN4-205ENST00000477174 HIST1H2AGP0C0S8 130 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-205ENST00000477174 HIST1H2ADP20671 130 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 CMPK1P30085 196 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 RPA3P35244 121 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-205ENST00000477174 RORAP35398 523 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 GPX6P59796 221 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 TAP2Q03519 686 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 PRDX1Q06830 199 aaKnown RBP12.91□□□□□ -0.34
ACTN4-205ENST00000477174 GPS2Q13227 327 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 FCRL6Q6DN72 434 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 CAPN12Q6ZSI9 719 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 CEP128Q6ZU80 1094 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 CCDC25Q86WR0 208 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 SYTL1Q8IYJ3 562 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 ANKRD7Q92527 254 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 TTC9Q92623 222 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 DLG3Q92796 817 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 MR1Q95460 341 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 LINGO1Q96FE5 620 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 HIST1H2AHQ96KK5 128 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 CATSPER2Q96P56 530 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 OLFM1Q99784 485 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 CPNE1Q99829 537 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 HIST1H2AJQ99878 128 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 H2AFJQ9BTM1 129 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 SLC7A5P2Q9GIP4 190 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 SPRTNQ9H040 489 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-205ENST00000477174 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 SMYD2Q9NRG4 433 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 ZDHHC18Q9NUE0 388 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 UTP6Q9NYH9 597 aaKnown RBP12.91□□□□□ -0.34
ACTN4-205ENST00000477174 TXNDC16Q9P2K2 825 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 ATMQ13315 3056 aa12.91□□□□□ -0.34
ACTN4-205ENST00000477174 CACNA1GO43497 2377 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 ESYT3A0FGR9 886 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 NKX2-8O15522 239 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 ZSCAN9O15535 394 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-205ENST00000477174 CCNDBP1O95273 360 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 F8A1P23610 371 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 RPS15P62841 145 aaKnown RBP12.9□□□□□ -0.34
ACTN4-205ENST00000477174 ABATP80404 500 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 POU4F1Q01851 419 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 RELAQ04206 551 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 DNASE1L3Q13609 305 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 SOWAHCQ53LP3 525 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-205ENST00000477174 TCTE1Q5JU00 501 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 PRAMEF17Q5VTA0 474 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 RHBDD2Q6NTF9 364 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 SUSD1Q6UWL2 747 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 LRRC56Q8IYG6 542 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-205ENST00000477174 DSELQ8IZU8 1212 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 NKAPQ8N5F7 415 aaKnown RBP12.9□□□□□ -0.34
ACTN4-205ENST00000477174 CEP112Q8N8E3 955 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 NOA1Q8NC60 698 aaKnown RBP12.9□□□□□ -0.34
ACTN4-205ENST00000477174 CT55Q8WUE5 264 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 STARD8Q92502 1023 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 RNF31Q96EP0 1072 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 ZNF285Q96NJ3 590 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 DPH7Q9BTV6 452 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 TRIM54Q9BYV2 358 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 PCBD2Q9H0N5 130 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 AKIRIN1Q9H9L7 192 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-205ENST00000477174 POPDC3Q9HBV1 291 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 PCMTD2Q9NV79 361 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 ANKMY1Q9P2S6 941 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 ADAMTS6Q9UKP5 1117 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 SNX7Q9UNH6 387 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 SRPK3Q9UPE1 567 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 PDE10AQ9Y233 779 aa12.9□□□□□ -0.34
ACTN4-205ENST00000477174 FARSAQ9Y285 508 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms